CX299939
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299939 vs. ExPASy Swiss-Prot
Match: CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana GN=CAF1-3 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22 Identity = 70/202 (34.65%), Postives = 102/202 (50.50%), Query Frame = 2 Query: 29 SSYEYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTC-QNLPDTQVEFFNLIR-IYFPTVYDIKHLMKFCNSLHG--GLNKLAELLEVERVGICHQAGSDSLLTASTFRXLKXNFFSS 622 +S E Y+ +K NVD LIQLG T D G T W+ N +FD ++ + SI LK +G+N K E GI F + WV F YD YL+K LT + LP+T+ EF ++ + V+D+K + + C+ L GL ++A++L+++RVG H AGSDS LTA F L + +S Sbjct: 48 ASEEIRYRDMKFNVDNTHLIQLGFTLFDRRGFAKT--------WEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFRDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVKKIAESCSGLSSQFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLTFDLLNS 241
BLAST of CX299939 vs. ExPASy Swiss-Prot
Match: CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana GN=CAF1-8 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21 Identity = 71/187 (37.97%), Postives = 92/187 (49.20%), Query Frame = 2 Query: 38 EYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHG--GLNKLAELLEVERVGICHQAGSDSLLTASTF 592 E Y + +VD KLIQLGLT D NG + GT W+ NF +F V +D SIE L+++G++ K E GI F M ++ WVTFH YD YLLK T + LP T F + +VYD+K + C L GL LA + RVG H AGS++ LTA F Sbjct: 34 EERYMDMSFSVDRAKLIQLGLTLFDINGRIG--GT-----WEINFSDFGV-DDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLSSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVF 212
BLAST of CX299939 vs. ExPASy Swiss-Prot
Match: CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana GN=CAF1-4 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21 Identity = 69/202 (34.16%), Postives = 102/202 (50.50%), Query Frame = 2 Query: 29 SSYEYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTC-QNLPDTQVEFFNLI-RIYFPTVYDIKHLMKFCNSLHG--GLNKLAELLEVERVGICHQAGSDSLLTASTFRXLKXNFFSS 622 +S E Y+ +K NVD LIQLG T D G T W+ N +F+ ++ + SI LK +G+N K E GI F + WV F YD YL+K LT + LP+T+ EF + ++ V+D+K + + C+ L GL ++A++L+++RVG H AGSDS LTA F L + +S Sbjct: 43 ASEEIRYRDMKFNVDNTHLIQLGFTLFDRRGITKT--------WEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFRDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVKKIAESCSGLSSRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLTFDLLNS 236 The following BLAST results are available for this feature:
BLAST of CX299939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299939 ID=CX299939; Name=CX299939; organism=Citrus clementina; type=EST; length=740bpback to top |