CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_CARPA (50S ribosomal protein L2, chloroplastic OS=Carica papaya GN=rpl2-A PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 9.950e-40 Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_BARVE (50S ribosomal protein L2, chloroplastic OS=Barbarea verna GN=rpl2-A PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 9.950e-40 Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_ARAHI (50S ribosomal protein L2, chloroplastic OS=Arabis hirsuta GN=rpl2-A PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 9.950e-40 Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_AETGR (50S ribosomal protein L2, chloroplastic OS=Aethionema grandiflora GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.697e-39 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSAT+KLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATIKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_AETCO (50S ribosomal protein L2, chloroplastic OS=Aethionema cordifolium GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.697e-39 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSAT+KLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATIKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_NUPAD (50S ribosomal protein L2, chloroplastic OS=Nuphar advena GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.217e-39 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_GOSHI (50S ribosomal protein L2, chloroplastic OS=Gossypium hirsutum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.217e-39 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_GOSBA (50S ribosomal protein L2, chloroplastic OS=Gossypium barbadense GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.217e-39 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_ARATH (50S ribosomal protein L2, chloroplastic OS=Arabidopsis thaliana GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.217e-39 Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_ACOCL (50S ribosomal protein L2, chloroplastic OS=Acorus calamus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.217e-39 Identity = 80/82 (97.56%), Postives = 82/82 (100.00%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVGANQ+SLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGANQQSLGRAGSKCWLGKRPVVRGV 221 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |