CX299948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_CUCSA (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.895e-39 Identity = 80/82 (97.56%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN G NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PLAOC (50S ribosomal protein L2, chloroplastic OS=Platanus occidentalis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.781e-39 Identity = 80/82 (97.56%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSAT GQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 146 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATFGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 227
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_MORIN (50S ribosomal protein L2, chloroplastic OS=Morus indica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 3.781e-39 Identity = 80/82 (97.56%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLI KNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLIPKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_POPTR (50S ribosomal protein L2, chloroplastic OS=Populus trichocarpa GN=rpl2-A PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 6.449e-39 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN G NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2B_POPAL (50S ribosomal protein L2-B, chloroplastic OS=Populus alba GN=rpl2-B PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 6.449e-39 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN G NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2A_POPAL (50S ribosomal protein L2-A, chloroplastic OS=Populus alba GN=rpl2-A PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 6.449e-39 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGN G NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 141 HNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV 222
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_LOTJA (50S ribosomal protein L2, chloroplastic OS=Lotus japonicus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.423e-39 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEIT GKGG+LARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITFGKGGKLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_ILLOL (50S ribosomal protein L2, chloroplastic OS=Illicium oligandrum GN=rpl2 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.423e-39 Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAG VAKLIAKEGKSATL+LPSGEVRL+SKNCSATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 142 HNIEITLGKGGQLARAAGTVAKLIAKEGKSATLRLPSGEVRLVSKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 223
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_PHAAO (50S ribosomal protein L2, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=rpl2-A PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.100e-38 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221
BLAST of CX299948 vs. ExPASy Swiss-Prot
Match: RK2_LEMMI (50S ribosomal protein L2, chloroplastic OS=Lemna minor GN=rpl2 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.100e-38 Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 2 Query: 2 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGV 247 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNC ATVGQVGNVG NQKSLGRAGSKCWLGKRPVVRGV Sbjct: 140 HNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCLATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGV 221 The following BLAST results are available for this feature:
BLAST of CX299948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299948 ID=CX299948; Name=CX299948; organism=Citrus clementina; type=EST; length=249bpback to top |