CX299976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299976 vs. ExPASy Swiss-Prot
Match: WRBA_RHORT (Flavoprotein wrbA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=wrbA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.320e-21 Identity = 58/129 (44.96%), Postives = 70/129 (54.26%), Query Frame = 3 Query: 15 DGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFA-GDGTREPSETELALAEHQGKYMAAVVKKL 398 DG L G PTR+G MA QM+ F D TG LW +GKLVGK G F S + T HHGM+ V + Y MF R G PYGA A GDG+R+PS+ E +A QG++ A V KKL Sbjct: 74 DGILIGTPTRFGNMAGQMRNFLDQTGGLWAKGKLVGKAGGAFTSTATGGGAETTLL-SVYTNFLHHGMVVVGVPYG-TPEMFDTSEARAGGPYGAATLAGGDGSRQPSDKERTIARFQGRHFAGVAKKL 200
BLAST of CX299976 vs. ExPASy Swiss-Prot
Match: WRBA_BURCM (Flavoprotein wrbA OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=wrbA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.320e-21 Identity = 56/129 (43.41%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 15 DGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTREPSETELALAEHQGKYMAAVVKKL 398 D +FG PTR+G MA QM+ F D TG LW +G LVGK F S + T L H GM+ V + Y +G+ M I GG+PYGA AG DG+R+PS EL +A +QGK++A + KL Sbjct: 71 DAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHTTLLHQGMVIVGVPYAC-SGLVNMSEITGGTPYGATTLAGADGSRQPSANELDIARYQGKHVAELAVKL 198
BLAST of CX299976 vs. ExPASy Swiss-Prot
Match: WRBA_ACICJ (Flavoprotein wrbA OS=Acidiphilium cryptum (strain JF-5) GN=wrbA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.320e-21 Identity = 55/129 (42.64%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 15 DGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTREPSETELALAEHQGKYMAAVVKKL 398 D +FG PTR+G M QM+ F D TG LW +G L+GK F S + T L HHGM+ V + Y+ + M+ I GG+PYGA AG DG+R+PS ELA+A QGK++A + KL Sbjct: 70 DAIIFGTPTRFGNMCGQMRNFLDQTGGLWAKGALIGKVGSVFASTGTQHGGQETTITSFHTTLFHHGMIVVGVPYS-NPELTNMNEITGGTPYGATTLAGADGSRQPSANELAIARAQGKHVAGIAAKL 197
BLAST of CX299976 vs. ExPASy Swiss-Prot
Match: WRBA_CAUCR (Flavoprotein wrbA OS=Caulobacter crescentus GN=wrbA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.723e-21 Identity = 58/129 (44.96%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 15 DGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTREPSETELALAEHQGKYMAAVVKKL 398 D + G PTR+G MA+QM AFFD+ G LW G L GK AG F S ++ IT + H G V + Y AG +D I GGSPYGA AG DG+R+PSE EL A +QG+ +A KL Sbjct: 70 DAIIVGAPTRFGRMASQMAAFFDAAGGLWARGALHGKVAGAFTSTATQHGGQETTLFSIITNMLHFGTTIVGLDYGH-AGQMTLDEITGGSPYGATTIAGGDGSRQPSENELTGARYQGRKIAETAIKL 197
BLAST of CX299976 vs. ExPASy Swiss-Prot
Match: WRBA_CAUCN (Flavoprotein wrbA OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=wrbA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.723e-21 Identity = 58/129 (44.96%), Postives = 72/129 (55.81%), Query Frame = 3 Query: 15 DGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTREPSETELALAEHQGKYMAAVVKKL 398 D + G PTR+G MA+QM AFFD+ G LW G L GK AG F S ++ IT + H G V + Y AG +D I GGSPYGA AG DG+R+PSE EL A +QG+ +A KL Sbjct: 70 DAIIVGAPTRFGRMASQMAAFFDAAGGLWARGALHGKVAGAFTSTATQHGGQETTLFSIITNMLHFGTTIVGLDYGH-AGQMTLDEITGGSPYGATTIAGGDGSRQPSENELTGARYQGRKIAETAIKL 197
BLAST of CX299976 vs. ExPASy Swiss-Prot
Match: WRBA_BURPP (Flavoprotein wrbA OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=wrbA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.723e-21 Identity = 55/129 (42.64%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 15 DGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTREPSETELALAEHQGKYMAAVVKKL 398 D +FG PTR+G MA QM+ F D TG LW +G LVGK F S + + L H GM+ V + Y+ AG+ M I GG+PYGA AG DG+R+PS+ EL +A QGK++A++ K+ Sbjct: 71 DAIIFGTPTRFGNMAGQMRTFLDQTGGLWMKGALVGKIGSVFASTGTQHGGQETTITSFHSTLLHQGMVIVGVPYSC-AGLVNMTEITGGTPYGATTLAGADGSRQPSQNELDIARFQGKHVASLALKI 198
BLAST of CX299976 vs. ExPASy Swiss-Prot
Match: WRBA1_RHIME (Flavoprotein wrbA 1 OS=Rhizobium meliloti GN=wrbA1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.940e-21 Identity = 53/131 (40.46%), Postives = 73/131 (55.73%), Query Frame = 3 Query: 15 DGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAG-VFAGDGTREPSETELALAEHQGKYMAAVVKKLCE 404 D +FG TRYG +A+Q++ F D TG LW +GKLVGK F S I + HHGM+ V + Y F G ++ ++GGSPYGA + GDG+R+PS EL A QG ++A + KL + Sbjct: 70 DAIIFGAGTRYGTVASQLRNFIDQTGGLWAKGKLVGKVGSAFTSSATQHGGQESTILGLIPTMMHHGMVVVGLPYAF-QGQMGVEEVKGGSPYGASTITGGDGSRQPSAVELEAARFQGAHVARIAAKLAD 199
BLAST of CX299976 vs. ExPASy Swiss-Prot
Match: WRBA_RHOPT (Flavoprotein wrbA OS=Rhodopseudomonas palustris (strain TIE-1) GN=wrbA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21 Identity = 57/129 (44.19%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 15 DGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGA-GVFAGDGTREPSETELALAEHQGKYMAAVVKKL 398 D + G TR+G MA+QM F D G LW G L GK G F S ++ IT L H GM+ V + Y FG M ++D + GG+PYGA + GDG+R+PSETELA A +QGK +A KL Sbjct: 70 DAIVIGTGTRFGRMASQMSNFLDQAGGLWARGALNGKVGGAFTSTATQHGGQETTLFSIITNLLHFGMVVVGLNYGFGDQM-RLDQVTGGAPYGATTITGGDGSRQPSETELAGARYQGKTIAETAIKL 197
BLAST of CX299976 vs. ExPASy Swiss-Prot
Match: WRBA_RHOPA (Flavoprotein wrbA OS=Rhodopseudomonas palustris GN=wrbA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21 Identity = 57/129 (44.19%), Postives = 73/129 (56.59%), Query Frame = 3 Query: 15 DGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGA-GVFAGDGTREPSETELALAEHQGKYMAAVVKKL 398 D + G TR+G MA+QM F D G LW G L GK G F S ++ IT L H GM+ V + Y FG M ++D + GG+PYGA + GDG+R+PSETELA A +QGK +A KL Sbjct: 70 DAIVIGTGTRFGRMASQMSNFLDQAGGLWARGALNGKVGGAFTSTATQHGGQETTLFSIITNLLHFGMVVVGLNYGFGDQM-RLDQVTGGAPYGATTITGGDGSRQPSETELAGARYQGKTIAETAIKL 197
BLAST of CX299976 vs. ExPASy Swiss-Prot
Match: WRBA_GEOUR (Flavoprotein wrbA OS=Geobacter uraniireducens (strain Rf4) GN=wrbA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21 Identity = 55/129 (42.64%), Postives = 71/129 (55.04%), Query Frame = 3 Query: 15 DGFLFGFPTRYGCMAAQMKAFFDSTGMLWKEGKLVGKPAGFFVSXXXXXXXXXXXAWTAITQLAHHGMLFVPIGYTFGAGMFKMDSIRGGSPYGAGVFAG-DGTREPSETELALAEHQGKYMAAVVKKL 398 D +FG PTR+G M QM+ F D+TG LW +G LVGK F S + L H GM+ V + Y F G + D I GGSPYGA AG G R PSE +LA A +QGK++A++ +L Sbjct: 74 DAIIFGTPTRFGNMCGQMRQFLDATGGLWMKGSLVGKLGSVFTSSATQHGGQESTILSFHITLLHQGMVVVGLPYAF-QGQMRNDEIIGGSPYGASTIAGTQGERSPSENDLAAARYQGKHVASIAARL 201 The following BLAST results are available for this feature:
BLAST of CX299976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299976 ID=CX299976; Name=CX299976; organism=Citrus clementina; type=EST; length=683bpback to top |