CX300037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.599e-34 Identity = 79/139 (56.83%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKK-TFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 416 RARAAALNIVPTST NGIALRVPTPN K AE+VN AFR++A LKG+L VCD PLVSVDFRC MG DMVKV+AWYDNEWGYSQRVVDLAD+VAN W Sbjct: 283 RARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNIEKVGVTAEDVNNAFRKAAAGPLKGVLDVCDIPLVSVDFRCSDFSSTIDSSLTMVMGGDMVKVVAWYDNEWGYSQRVVDLADLVANKW 421
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.426e-32 Identity = 71/139 (51.08%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 419 RAR+AALNIVPT+T NGIALRVPTPN SKKTF EEVN A ++A+ +KGI+ DEPLVS D+R MGDDM+KV+AWYDNEWGYSQRVVDL +++A+ WK Sbjct: 278 RARSAALNIVPTTTGAAKAVALVVPTLAGKLNGIALRVPTPNVSVCDVVMQVSKKTFKEEVNGALLKAANGSMKGIIKYSDEPLVSCDYRGTDESTIIDSSLTMVMGDDMLKVVAWYDNEWGYSQRVVDLGEVMASQWK 416
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3) HSP 1 Score: 136.346 bits (342), Expect = 9.245e-32 Identity = 74/139 (53.24%), Postives = 81/139 (58.27%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 419 RARAAA+NIVPTST NGIALRVPTPN K T AE+VN +E+A+ LKG+L D LVS DFR MG DMVKVIAWYDNEWGYSQRVVDLA+IVA NWK Sbjct: 199 RARAAAVNIVPTSTGAAKAVALVIPELQGKLNGIALRVPTPNVSVVDLVVQVEKNTIAEQVNGVLKEAANTSLKGVLEYTDLELVSSDFRGTDCSSTVDGSLTMVMGGDMVKVIAWYDNEWGYSQRVVDLAEIVAKNWK 337
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.577e-31 Identity = 69/139 (49.64%), Postives = 83/139 (59.71%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 419 RAR+AALNIVPT+T NGIALRVPTPN +KKTF EEVN A ++++ +KGI+ DEPLVS D R MGDDM+KV+AWYDNEWGYSQRVVDL +++A WK Sbjct: 276 RARSAALNIVPTTTGAAKAVALVVPSLKGKLNGIALRVPTPNVSVCDVVMQVNKKTFKEEVNGALLKASEGAMKGIIKYSDEPLVSCDHRGTDESTIIDSSLTMVMGDDMIKVVAWYDNEWGYSQRVVDLGEVMARQWK 414
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.632e-28 Identity = 66/122 (54.10%), Postives = 73/122 (59.84%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWG 368 RARAAALNIVPT+T NGIALRVPTPN KKTFAEE+N AF+E+A L G+L+V DEPLVSVDFRC MG DMVKV+AWYDNEWG Sbjct: 193 RARAAALNIVPTTTGAAKAVALVLPKLKGKLNGIALRVPTPNVSVVDLVVQVEKKTFAEEINNAFKEAAAGSLNGVLAVSDEPLVSVDFRCTDVSSTIDSSLTMVMGADMVKVVAWYDNEWG 314
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 4.748e-28 Identity = 64/138 (46.38%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 416 RARAAA+NIVPTST NG+ALRVPTPN K+T EEVN A +++++ LKGIL + LVS D++ MG+D+VKV+AWYDNEWGYSQRV+DLA++VA W Sbjct: 199 RARAAAINIVPTSTGAAKAVALVIPELKGKLNGVALRVPTPNVSMVDFVVQVEKRTITEEVNQALKDASEGPLKGILDYSELQLVSSDYQGTDASSIVDASLTLVMGNDLVKVMAWYDNEWGYSQRVLDLAELVAEKW 336
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.748e-28 Identity = 64/138 (46.38%), Postives = 81/138 (58.70%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNW 416 RARAAA+NIVPTST NG+ALRVPTPN K+T EEVN A +++++ LKGIL + LVS D++ MG+D+VKV+AWYDNEWGYSQRV+DLA++VA W Sbjct: 199 RARAAAINIVPTSTGAAKAVALVIPELKGKLNGVALRVPTPNVSMVDFVVQVEKRTITEEVNQALKDASEGPLKGILDYSELQLVSSDYQGTDASSIVDANLTLVMGNDLVKVMAWYDNEWGYSQRVLDLAELVAEKW 336
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P1_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus subtilis GN=gapA PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 3.521e-23 Identity = 62/135 (45.93%), Postives = 75/135 (55.56%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 407 RARAAA NI+PTST NG A+RVPTPN +++ AEEVNAA +E+A+ +LKGIL +EPLVS D+ M MVKVI+WYDNE GYS RVVDLA +A Sbjct: 197 RARAAAENIIPTSTGAAKAVSLVLPELKGKLNGGAMRVPTPNVSLVDLVAELNQEVTAEEVNAALKEAAEGDLKGILGYSEEPLVSGDYNGNKNSSTIDALSTMVMEGSMVKVISWYDNESGYSNRVVDLAAYIA 331
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_BACME (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus megaterium GN=gap PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.282e-22 Identity = 60/135 (44.44%), Postives = 73/135 (54.07%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVA 407 RARAAA NI+PTST NG A+RVPTPN K+ E+VN A +E+A+ +LKGIL +EPLVS D+ M +MVKVI+WYDNE GYS RVVDLA +A Sbjct: 197 RARAAAENIIPTSTGAAKAVSLVLPELKGKLNGGAMRVPTPNVSLVDLVAELDKEVTVEDVNNALKEAAEGDLKGILGYSEEPLVSGDYNGNINSSTIDALSTMVMEGNMVKVISWYDNESGYSNRVVDLAQYIA 331
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P1_BACCE (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus cereus GN=gap1 PE=1 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 2.981e-22 Identity = 59/131 (45.04%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 395 RARAAA N++PTST NG A+RVPT N K+ EEVNAAF+ +A+ ELKGIL +EPLVS+D+ M +MVKV++WYDNE GYS RVVDLA Sbjct: 196 RARAAAENMIPTSTGAAKAVALVLPELKGKLNGGAVRVPTANVSLVDLVVELDKEVTVEEVNAAFKAAAEGELKGILGYSEEPLVSIDYNGCTASSTIDALSTMVMEGNMVKVLSWYDNETGYSNRVVDLA 326 The following BLAST results are available for this feature:
BLAST of CX300037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 270
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300037 ID=CX300037; Name=CX300037; organism=Citrus clementina; type=EST; length=555bpback to top |