CX300037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_ECO5E (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=epd PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.367e-11 Identity = 39/129 (30.23%), Postives = 55/129 (42.64%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 389 R RAA+ +I+P T IA+RVPT N K A EVN +++A GI+ + PLVSVDF G ++K + W DNEWG++ R++D Sbjct: 200 RTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_ECO57 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O157:H7 GN=epd PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.367e-11 Identity = 39/129 (30.23%), Postives = 55/129 (42.64%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 389 R RAA+ +I+P T IA+RVPT N K A EVN +++A GI+ + PLVSVDF G ++K + W DNEWG++ R++D Sbjct: 200 RTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_ECO55 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=epd PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.367e-11 Identity = 39/129 (30.23%), Postives = 55/129 (42.64%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 389 R RAA+ +I+P T IA+RVPT N K A EVN +++A GI+ + PLVSVDF G ++K + W DNEWG++ R++D Sbjct: 200 RTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_ECO27 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=epd PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.367e-11 Identity = 39/129 (30.23%), Postives = 55/129 (42.64%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 389 R RAA+ +I+P T IA+RVPT N K A EVN +++A GI+ + PLVSVDF G ++K + W DNEWG++ R++D Sbjct: 200 RTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_ECO24 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=epd PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.367e-11 Identity = 39/129 (30.23%), Postives = 55/129 (42.64%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 389 R RAA+ +I+P T IA+RVPT N K A EVN +++A GI+ + PLVSVDF G ++K + W DNEWG++ R++D Sbjct: 200 RTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_SHIDS (D-erythrose-4-phosphate dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=epd PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.092e-11 Identity = 39/129 (30.23%), Postives = 55/129 (42.64%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 389 R RAA+ +I+P T IA+RVPT N K A EVN +++A GI+ + PLVSVDF G ++K + W DNEWG++ R++D Sbjct: 200 RTRAASQSIIPIDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_PSEHT (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=epd PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.092e-11 Identity = 40/131 (30.53%), Postives = 57/131 (43.51%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLA 395 R RAA+ +I+P T IA+RVPT N + VN A + A + L+GILS EPLVS+DF ++K++ W DNEWG++ R++D A Sbjct: 200 RTRAASQSIIPVDTKLARGIDRILPKFKGRFEAIAVRVPTINVTAMDLSVTVNTDVDLNAVNNALKAQAKDRLEGILSYTAEPLVSIDFNHDPHSCIIDGTQTRVSHKRLIKLLVWCDNEWGFANRMLDTA 330
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_CITK8 (D-erythrose-4-phosphate dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=epd PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.038e-11 Identity = 38/129 (29.46%), Postives = 55/129 (42.64%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 389 R RAA+ +I+P T IA+RVPT N K A EVN +++A GI+ + PLVS+DF G ++K + W DNEWG++ R++D Sbjct: 200 RTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNQLLQKAAHGAFHGIVDYTELPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLD 328
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_CHLTR (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia trachomatis GN=gap PE=3 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 6.888e-11 Identity = 41/137 (29.93%), Postives = 58/137 (42.34%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVANNWK 419 R A NI+P ST G+A RVP + S T E + A + +A+ +K I+ +E +VS DF + D K++AWYDNE GY+ R+VDL + V N K Sbjct: 198 RGAFQNIIPASTGAAKAVGLCLPELKGKLTGMAFRVPVADVSVVDLTVKLSSATTYEAICEAVKHAANTSMKNIMYYTEEAVVSSDFIGCEYSSVFDAQAGVALNDRFFKLVAWYDNEIGYATRIVDLLEYVQENSK 334
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPW (D-erythrose-4-phosphate dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=epd PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.996e-11 Identity = 35/129 (27.13%), Postives = 55/129 (42.64%), Query Frame = 3 Query: 3 RARAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVD 389 R RAA +I+P T I++RVPT N K+ E+VN +++ + G++ +EPLVS DF +VK++ W DNEWG++ R++D Sbjct: 199 RTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLDKRVDIEQVNRVLKQATEGSFSGVVGYTNEPLVSCDFNHDPRSSIVDGTQTRVSDGHLVKLLLWCDNEWGFANRMLD 327 The following BLAST results are available for this feature:
BLAST of CX300037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 270
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300037 ID=CX300037; Name=CX300037; organism=Citrus clementina; type=EST; length=555bpback to top |