CX300037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.069e-15 Identity = 44/134 (32.84%), Postives = 64/134 (47.76%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDLADIVAN 410 R AA NI+P ST G+A RVPTPN K +++ +++++ LKGIL ++ +VS DF + D+ VK+I+WYDNE+GYS RVVDL +A+ Sbjct: 198 RGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSNSHSSTFDAGAGIALNDNFVKLISWYDNEYGYSNRVVDLMAYMAS 331
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P_ATRNU (Glyceraldehyde-3-phosphate dehydrogenase OS=Atriplex nummularia PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.069e-15 Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 392 RAA+ NI+P+ST G++ RVPT + K+ E++ AA +E ++ ++KGIL ++ +VS DF + + VK+++WYDNEWGYS RVVDL Sbjct: 202 RAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKEATYEQIKAAIKEESEGKMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGICLNGNFVKLVSWYDNEWGYSSRVVDL 329
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3PD_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 OS=Zea mays GN=GAPC2 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.069e-15 Identity = 43/128 (33.59%), Postives = 61/128 (47.66%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 392 RAA+ NI+P+ST G++ RVPT + K EE+ A + +++ LKGI+ +E LVS DF + D +K+++WYDNEWGYS RVVDL Sbjct: 202 RAASFNIIPSSTGAAKAVGKVLPELNGKLTGMSFRVPTVDVSVVDLTVRIEKGASYEEIKKAIKAASEGPLKGIMGYVEEDLVSTDFTGDSRSSIFDAKAGIALNDHFIKLVSWYDNEWGYSNRVVDL 329
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.069e-15 Identity = 42/128 (32.81%), Postives = 62/128 (48.44%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 392 R+AA NI+P++T G+A RVPT + K + + A +E+++ ++KGIL ++ +VS DF + D VK++AWYDNEWGYS RVVDL Sbjct: 204 RSAATNIIPSATGAAKAVGKVLPELNGKLTGMAFRVPTTDVSVVDLTVRLEKPASYDAIKTAIKEASEGQMKGILGYTEDDVVSTDFITDSRSSIFDAKAGIALSDTFVKLVAWYDNEWGYSNRVVDL 331
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSJ (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. japonica GN=GAPC PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.069e-15 Identity = 42/128 (32.81%), Postives = 63/128 (49.22%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 392 RAA+ NI+P+ST G++ RVPT + K + + +A + +++ +LKGI+ +E LVS DF + D+ VK++AWYDNEWGYS RV+DL Sbjct: 202 RAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDL 329
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. indica GN=GAPC PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.069e-15 Identity = 42/128 (32.81%), Postives = 63/128 (49.22%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 392 RAA+ NI+P+ST G++ RVPT + K + + +A + +++ +LKGI+ +E LVS DF + D+ VK++AWYDNEWGYS RV+DL Sbjct: 202 RAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDL 329
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3PC_ARATH (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Arabidopsis thaliana GN=GAPC PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.069e-15 Identity = 43/128 (33.59%), Postives = 62/128 (48.44%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 392 RAA+ NI+P+ST G++ RVPT + K +E+ A +E ++ +LKGIL ++ +VS DF + D VK+++WYDNEWGYS RVVDL Sbjct: 204 RAASFNIIPSSTGAAKAVGKVLPALNGKLTGMSFRVPTVDVSVVDLTVRLEKAATYDEIKKAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDL 331
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P1_SHIFL (Glyceraldehyde-3-phosphate dehydrogenase A OS=Shigella flexneri GN=gapA PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.069e-15 Identity = 42/128 (32.81%), Postives = 63/128 (49.22%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 392 R A+ NI+P+ST G+A RVPTPN K E++ AA + +A+ E+KG+L ++ +VS DF + D+ VK+++WYDNE GYS +V+DL Sbjct: 198 RGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDL 325
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P1_SALTY (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhimurium GN=gapA PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.069e-15 Identity = 42/128 (32.81%), Postives = 63/128 (49.22%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 392 R A+ NI+P+ST G+A RVPTPN K E++ AA + +A+ E+KG+L ++ +VS DF + D+ VK+++WYDNE GYS +V+DL Sbjct: 198 RGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDL 325
BLAST of CX300037 vs. ExPASy Swiss-Prot
Match: G3P1_SALTI (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhi GN=gapA PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.069e-15 Identity = 42/128 (32.81%), Postives = 63/128 (49.22%), Query Frame = 3 Query: 9 RAAALNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCXXXXXXXXXXXXXXMGDDMVKVIAWYDNEWGYSQRVVDL 392 R A+ NI+P+ST G+A RVPTPN K E++ AA + +A+ E+KG+L ++ +VS DF + D+ VK+++WYDNE GYS +V+DL Sbjct: 198 RGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDL 325 The following BLAST results are available for this feature:
BLAST of CX300037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 270
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300037 ID=CX300037; Name=CX300037; organism=Citrus clementina; type=EST; length=555bpback to top |