CX300039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_METTH (30S ribosomal protein S7P OS=Methanobacterium thermoautotrophicum GN=rps7p PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.101e-22 Identity = 52/109 (47.71%), Postives = 81/109 (74.31%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 328 + A EII+ T +NP+Q++V AV N+ PRE+ TRI G+ + AVDISP RRV+ ++ +T GA ++AF+N K+I ECLA+E++ AA+ + S+AI+KK+E ER+A++ Sbjct: 76 QEAFEIINRRTKENPVQILVKAVENTSPREETTRIKYGGIGYQVAVDISPQRRVDLSLGFITRGAMQAAFKNKKSIEECLANEIMLAAEYDTRSFAIQKKEEKERIARS 184
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_METBF (30S ribosomal protein S7P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps7p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.438e-22 Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 + A +I+ T QNPIQV+VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G +AF++ +++AECLA ELI AA + S+AI +KD ERVAKA R Sbjct: 75 EEAFDIVSKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNNAAFKSKRSVAECLATELIGAANRDTKSFAINRKDAKERVAKAAR 185
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_METMA (30S ribosomal protein S7P OS=Methanosarcina mazei GN=rps7p PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.877e-22 Identity = 51/111 (45.95%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 + A +II+ T QNPIQ++VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G +AF++ +++AECLA ELI AA + S++I +KD ERVAKA R Sbjct: 79 EEAFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKERVAKAAR 189
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_DESK1 (30S ribosomal protein S7P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps7p PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.877e-22 Identity = 53/111 (47.75%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 K + E+I+L T +NP+QV+V A+ N+ PRE+ TRI G+ +VDI+PLRR++ A+ LT GAR AF N +I E LA+E+ AA SYA++KK+EIER+A ++R Sbjct: 88 KKSFELIYLKTGENPLQVLVRAIENAAPREETTRIMYGGITYHVSVDIAPLRRIDLALRHLTEGARLKAFHNPISIEEALAEEIALAASNDPKSYAVQKKEEIERIALSSR 198
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_METAC (30S ribosomal protein S7P OS=Methanosarcina acetivorans GN=rps7p PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.452e-22 Identity = 51/111 (45.95%), Postives = 77/111 (69.37%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 + A +I++ T QNPIQV+VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G +AF++ +++AECLA ELI AA + S++I +KD ERVAKA R Sbjct: 79 EEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKERVAKAAR 189
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_CALMQ (30S ribosomal protein S7P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps7p PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 4.183e-22 Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 K A +II++ T +NP+QV VDAV+N PRE+ TR+ G+ +VD+ P RR++ AI + GAR +F N + I ECLA+E+I AA SYA++++DE+ERVA R Sbjct: 114 KTAFDIIYVATGKNPVQVFVDAVVNVAPREEITRVIYGGIAYPVSVDVGPTRRLDLAIRWIAEGARACSFNNPRPIEECLANEIIAAANNDPASYALRRRDEMERVAATAR 224
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_METTP (30S ribosomal protein S7P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps7p PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.463e-22 Identity = 50/111 (45.05%), Postives = 76/111 (68.47%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 + A +IIH T +NP+ V+V A+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ L+ GA +++F++ ++I CLADE+I AA S+A+ +KD IERVAKA R Sbjct: 75 EEAFDIIHSRTKENPLSVLVRAISNAGPREEVVRLKYGGITVPKAVDTAPQRRVDTALMLIAKGAWQASFKSRRSIQNCLADEIIAAANYDVKSFAVSRKDSIERVAKAAR 185
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_META3 (30S ribosomal protein S7P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps7p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.624e-21 Identity = 50/112 (44.64%), Postives = 78/112 (69.64%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 334 + A EII T++NP++V+V+A+ N GPRE+ TRI G+ Q+VD+SP RR++ A+ + G SA +N K+ A+CLADE++ A+K S+A++KK+E ERVA++ R Sbjct: 77 EEAFEIIEKRTNENPVKVLVEALENGGPREETTRISYGGIAFLQSVDVSPSRRLDTALRNIAIGTLNSAHKNKKSAAQCLADEIMFASKADMQRSFAVRKKEEKERVAQSAR 188
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_THEGJ (30S ribosomal protein S7P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps7p PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.040e-21 Identity = 52/111 (46.85%), Postives = 71/111 (63.96%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 K A II T QNPIQV++ A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN T A+ LA+E+I AA S+A KK+EIER+A+++R Sbjct: 105 KEAFMIIERRTKQNPIQVLIRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDVALKNIALGASIKCYRNKTTYAQALAEEIIAAANRDPKSFAYSKKEEIERIAQSSR 215
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_HALMA (30S ribosomal protein S7P OS=Haloarcula marismortui GN=rps7p PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.040e-21 Identity = 51/109 (46.79%), Postives = 70/109 (64.22%), Query Frame = 2 Query: 8 AMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 A E++H TD+NPIQV+V AV NS PRE+ R+ G+ +AVD++P RRV+QA+ L G +F+ T AE LA +LI AA +YA+ +K+E ERVA A R Sbjct: 98 AFELVHERTDENPIQVLVSAVENSAPREETVRLKYGGISVPKAVDVAPQRRVDQALKFLAEGVYGGSFKTTTTAAEALAQQLIGAANDDVQTYAVNQKEEKERVAAAAR 206 The following BLAST results are available for this feature:
BLAST of CX300039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300039 ID=CX300039; Name=CX300039; organism=Citrus clementina; type=EST; length=399bpback to top |