CX300039
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_PYRKO (30S ribosomal protein S7P OS=Pyrococcus kodakaraensis GN=rps7p PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.030e-20 Identity = 52/111 (46.85%), Postives = 71/111 (63.96%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 K A II T QNPIQV+V A+ NS PRED T I G+ +VD+SPLRR++ A+ + GA +RN T A+ LA+E+I AA S+A KK+EIER+A+++R Sbjct: 105 KEAFMIIERRTKQNPIQVLVKAIENSAPREDTTTIAFGGIRYHMSVDVSPLRRLDIALKNIALGASIKCYRNKTTYAQALAEEIIAAANKDPKSFAYSKKEEIERIAQSSR 215
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_METHJ (30S ribosomal protein S7P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps7p PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.030e-20 Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 + A EI+H T +NPI+V+ DAV N+GPRE+ R+ G+ ++VD +P+RRVN A+ L+ G ++ + K +A LA+ELI AA G Y++ K++E ERVAK+ R Sbjct: 84 RDAFEIVHQKTKKNPIEVLCDAVANAGPREETVRLKYGGINVPKSVDTAPMRRVNTAVGLIAAGVYSASHKKKKPVANALAEELIAAANGDVKCYSVAKREERERVAKSAR 194
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_THEON (30S ribosomal protein S7P OS=Thermococcus onnurineus (strain NA1) GN=rps7p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.295e-20 Identity = 51/111 (45.95%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 K A II T QNPIQV + A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN + A+ LA+E+I AA S+A KK+EIER+A+++R Sbjct: 105 KEAFMIIERRTKQNPIQVFIRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDIALKNIALGASAKCYRNKTSYAQALAEEIIAAANKDPKSFAYSKKEEIERIAQSSR 215
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_THECE (30S ribosomal protein S7P OS=Thermococcus celer GN=rps7p PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.997e-20 Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 K A II T QNPIQV+V A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN + A+ LA+E+I AA ++A +K+EIER+A+++R Sbjct: 105 KEAFMIIERRTKQNPIQVLVRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDIALKNIALGASAKCYRNKTSYAQALAEEIIAAANADPKTFAYSRKEEIERIAQSSR 215
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_METBU (30S ribosomal protein S7P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps7p PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 6.678e-20 Identity = 47/109 (43.12%), Postives = 76/109 (69.72%), Query Frame = 2 Query: 8 AMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 A +I++ T +NP+QV+V+AV N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G+ ++AF++ ++ AECLA ELI A+ + ++I +KD ERVAKA R Sbjct: 78 AFDIVNSKTKKNPVQVLVEAVSNAGPREEVVRLKYGGISVPKAVDTAPQRRVDHALRNISIGSNQTAFKSKRSAAECLASELIAASNRDAKCFSINRKDGKERVAKAAR 186
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_KORCO (30S ribosomal protein S7P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps7p PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.678e-20 Identity = 56/112 (50.00%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN-SYAIKKKDEIERVAKANR 334 K+A EII L T +NPIQV +DA+ NS RE+ TRI GV AVD SP R V+ AI + GA AFR+ +++AE LA+E+I AA+ N S+AI++K+EIER+A ++R Sbjct: 97 KYAFEIIELRTGKNPIQVFLDAIENSIIREEVTRIMYGGVSYFHAVDTSPSRMVDLAIRHIAQGAAMKAFRSPRSLAEALAEEIIAAAEYDRNRSFAIRRKEEIERIALSSR 208
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_HALSA (30S ribosomal protein S7P OS=Halobacterium salinarium GN=rps7p PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.488e-19 Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 + A +I+H TD+NPIQV+V AV N+ PRE+ R+ G+ QAVD +P RRV+QA+ L GA ++F+ AE LA++L AA + +YAI +K E ERVA A R Sbjct: 100 RDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALANQLAGAADYNVQTYAIGQKKEKERVAAAAR 210
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_PYRFU (30S ribosomal protein S7P OS=Pyrococcus furiosus GN=rps7p PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.943e-19 Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 K A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISP+RR++ A+ + GA +RN + AE LA+E+I AA SYA KK EIER+A+++R Sbjct: 105 KEAFKIIEQRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPMRRLDVALRNIALGASAKCYRNKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR 215
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_METLZ (30S ribosomal protein S7P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps7p PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.328e-19 Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 8 AMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 A ++I+ T QNP+QV+VDAV N+GPRE+ R+ G+ ++VD +P+RRVN A+ + + + + K LADELI AAKG + +++ KK+E+ER+AK+ R Sbjct: 86 AFDVINKKTKQNPLQVLVDAVANAGPREETVRLKYGGINVPKSVDSAPIRRVNTALRYIALATWKGSHKTKKPAYLVLADELIMAAKGDAKCFSVGKKEEVERIAKSAR 194
BLAST of CX300039 vs. ExPASy Swiss-Prot
Match: RS7_PYRHO (30S ribosomal protein S7P OS=Pyrococcus horikoshii GN=rps7p PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.653e-19 Identity = 51/111 (45.95%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 2 KHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 334 K A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISPLRR++ A+ + GA +R + AE LA+E+I AA SYA KK EIER+A+++R Sbjct: 108 KEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR 218 The following BLAST results are available for this feature:
BLAST of CX300039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300039 ID=CX300039; Name=CX300039; organism=Citrus clementina; type=EST; length=399bpback to top |