CX300097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAAM (Thioredoxin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=trxA PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + + Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAAC (Thioredoxin OS=Staphylococcus aureus (strain COL) GN=trxA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + + Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAAB (Thioredoxin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=trxA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + + Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAA8 (Thioredoxin OS=Staphylococcus aureus (strain NCTC 8325) GN=trxA PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + + Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAA3 (Thioredoxin OS=Staphylococcus aureus (strain USA300) GN=trxA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD+ +++ V S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A KY + SIPT++ FK+G+ + + Sbjct: 6 VTDADFDSKVESGVQ--LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_MYCTU (Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD+S+ V+SS PVLV+FWA WCGPC+M+AP +EE+A E A + KL+ D +P A + + SIPT++ FK+G+ + I Sbjct: 12 VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRI 95
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_MYCBO (Thioredoxin OS=Mycobacterium bovis GN=trxA PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTD+S+ V+SS PVLV+FWA WCGPC+M+AP +EE+A E A + KL+ D +P A + + SIPT++ FK+G+ + I Sbjct: 12 VTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRI 95
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO_STAHJ (Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=trxA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.977e-18 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 250 VTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESI 501 VTDS+++ + S LV+FWA WCGPC+MIAP +EELA +Y GK KL+ D++P+ A K+ + SIPT++ FK+GE + + Sbjct: 6 VTDSNFDENIQSGVK--LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKFEVMSIPTLIVFKDGEPVDKV 87
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO2_SHIFL (Thioredoxin-2 OS=Shigella flexneri GN=trxC PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.361e-17 Identity = 34/70 (48.57%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 277 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 ++ + PV+++FWAPWCGPCR AP E++A+E +GKV K+NT+ +++++GIRSIPT++ FKNG+ Sbjct: 48 LLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQ 117
BLAST of CX300097 vs. ExPASy Swiss-Prot
Match: THIO2_ECOLI (Thioredoxin-2 OS=Escherichia coli (strain K12) GN=trxC PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.361e-17 Identity = 34/70 (48.57%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 277 VISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGE 486 ++ + PV+++FWAPWCGPCR AP E++A+E +GKV K+NT+ +++++GIRSIPT++ FKNG+ Sbjct: 48 LLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRFGIRSIPTIMIFKNGQ 117 The following BLAST results are available for this feature:
BLAST of CX300097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300097 ID=CX300097; Name=CX300097; organism=Citrus clementina; type=EST; length=502bpback to top |