CX300104

Overview
NameCX300104
Unique NameCX300104
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length507
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_RHILO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhizobium loti GN=metE PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.154e-50
Identity = 99/156 (63.46%), Postives = 116/156 (74.36%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRI 478
            GPVTILNWSFVR+D PR   C Q+ALAI+DEV DLEKAG  +IQIDEAALREGLPLR+++   YL WAV  FR+ +  V D TQ+HTHMCYS F DI+ +I  MDADVI+IE SRS  +LL   R   KY   IGPGVYDIHSPR+P   EI++ I
Sbjct:  573 GPVTILNWSFVRDDLPRSAVCRQVALAIRDEVSDLEKAGAKMIQIDEAALREGLPLREADWQAYLDWAVECFRLASTAVGDATQIHTHMCYSEFGDIVDAIAAMDADVISIETSRSQLELLDTLRT-FKYPNEIGPGVYDIHSPRVPEVGEISNLI 727
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_RALPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia pickettii (strain 12J) GN=metE PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 8.038e-50
Identity = 98/163 (60.12%), Postives = 121/163 (74.23%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVL 499
            GPVT+L WSFVR+DQPR +T  QIALA++DEV DLE AGI  IQIDE A REGLPLR S+   YL+WA  +FR++  GV++ TQ+HTHMCYS FNDI+ +I  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSPR+P  +E+   ++K   V+
Sbjct:  558 GPVTMLQWSFVRDDQPREQTALQIALALRDEVCDLEAAGIAAIQIDEPAFREGLPLRASDVPTYLEWAARAFRVSASGVRNDTQIHTHMCYSEFNDILPAIASMDADVITIETSRSNMELLDAFAE-FAYPNEIGPGVYDIHSPRVPRVDEMESLLDKAAQVV 719
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_RALEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha GN=metE PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.050e-49
Identity = 99/163 (60.74%), Postives = 124/163 (76.07%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVL 499
            GP+T+L WSFVR+DQPR  T  Q+ALAI+DEV DLE+AGI VIQIDE ALREGLPLR+++ D YL WAV +FR++  GVQD TQ+HTHMCY+ FNDI+ +I  MDADVITIE SRS  +LL  F +   Y   IGPGVYDIHSPR+PS + +   +++   V+
Sbjct:  555 GPITMLQWSFVRDDQPRATTARQLALAIRDEVCDLEQAGIRVIQIDEPALREGLPLRRADWDAYLDWAVTAFRLSASGVQDQTQIHTHMCYAEFNDILPAIAAMDADVITIETSRSAMELLEGFGD-FDYPNEIGPGVYDIHSPRVPSVQAMERLLDRACEVV 716
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_RALEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metE PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.050e-49
Identity = 99/163 (60.74%), Postives = 124/163 (76.07%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAVL 499
            GP+T+L WSFVR+DQPR  T  Q+ALAI+DEV DLE+AGI VIQIDE ALREGLPLR+++ D YL WAV +FR++  GVQD TQ+HTHMCY+ FNDI+ +I  MDADVITIE SRS  +LL  F +   Y   IGPGVYDIHSPR+PS + +   +++   V+
Sbjct:  555 GPITMLQWSFVRDDQPRATTARQLALAIRDEVCDLEQAGIRVIQIDEPALREGLPLRRADWDAYLDWAVTAFRLSASGVQDQTQIHTHMCYAEFNDILPAIAAMDADVITIETSRSAMELLEGFGD-FDYPNEIGPGVYDIHSPRVPSVQAMERLLDRACEVV 716
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_COXB1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuK_Q154) GN=metE PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.050e-49
Identity = 97/154 (62.99%), Postives = 119/154 (77.27%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIAD 472
            GPVTIL WSFVR+DQPR +T  QIALA++DEV+DLE++G+ VIQIDE A RE LPLRK+    YL+WAV  FR+ + GV+D TQ+HTHMCYS FNDII +I  +DADVITIE+SRS+ ++L  F E   Y   IGPG+YDIHSPRIP   EI +
Sbjct:  558 GPVTILAWSFVRDDQPRSQTAKQIALALRDEVQDLERSGVRVIQIDEPAFRECLPLRKAAWQDYLEWAVKCFRLASCGVKDETQIHTHMCYSEFNDIIEAIAALDADVITIESSRSETEILKSF-EKFAYPNDIGPGIYDIHSPRIPRVAEIEE 710
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_COXBU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii GN=metE PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.371e-49
Identity = 97/154 (62.99%), Postives = 119/154 (77.27%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIAD 472
            GPVTIL WSFVR+DQPR +T  QIALA++DEV+DLE++G+ VIQIDE A RE LPLRK+    YL+WAV  FR+ + GV+D TQ+HTHMCYS FNDII +I  +DADVITIE+SRS+ ++L  F E   Y   IGPG+YDIHSPRIP   EI +
Sbjct:  558 GPVTILAWSFVRDDQPRSQTAKQIALALRDEVQDLERSGVRVIQIDEPAFRECLPLRKAAWQDYLEWAVKCFRLASCGVKDETQIHTHMCYSEFNDIIEAIAALDADVITIESSRSEMEILKSF-EKFAYPNDIGPGIYDIHSPRIPRVAEIEE 710
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_COXBR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=metE PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.371e-49
Identity = 97/154 (62.99%), Postives = 119/154 (77.27%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIAD 472
            GPVTIL WSFVR+DQPR +T  QIALA++DEV+DLE++G+ VIQIDE A RE LPLRK+    YL+WAV  FR+ + GV+D TQ+HTHMCYS FNDII +I  +DADVITIE+SRS+ ++L  F E   Y   IGPG+YDIHSPRIP   EI +
Sbjct:  558 GPVTILAWSFVRDDQPRSQTAKQIALALRDEVQDLERSGVRVIQIDEPAFRECLPLRKAAWQDYLEWAVKCFRLASCGVKDETQIHTHMCYSEFNDIIEAIAALDADVITIESSRSEMEILKSF-EKFAYPNDIGPGIYDIHSPRIPRVAEIEE 710
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_COXBN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metE PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.371e-49
Identity = 97/154 (62.99%), Postives = 119/154 (77.27%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIAD 472
            GPVTIL WSFVR+DQPR +T  QIALA++DEV+DLE++G+ VIQIDE A RE LPLRK+    YL+WAV  FR+ + GV+D TQ+HTHMCYS FNDII +I  +DADVITIE+SRS+ ++L  F E   Y   IGPG+YDIHSPRIP   EI +
Sbjct:  558 GPVTILAWSFVRDDQPRSQTAKQIALALRDEVQDLERSGVRVIQIDEPAFRECLPLRKAAWQDYLEWAVKCFRLASCGVKDETQIHTHMCYSEFNDIIEAIAALDADVITIESSRSEMEILKSF-EKFAYPNDIGPGIYDIHSPRIPRVAEIEE 710
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_COXB2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Coxiella burnetii (strain CbuG_Q212) GN=metE PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.371e-49
Identity = 97/154 (62.99%), Postives = 119/154 (77.27%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIAD 472
            GPVTIL WSFVR+DQPR +T  QIALA++DEV+DLE++G+ VIQIDE A RE LPLRK+    YL+WAV  FR+ + GV+D TQ+HTHMCYS FNDII +I  +DADVITIE+SRS+ ++L  F E   Y   IGPG+YDIHSPRIP   EI +
Sbjct:  558 GPVTILAWSFVRDDQPRSQTAKQIALALRDEVQDLERSGVRVIQIDEPAFRECLPLRKAAWQDYLEWAVKCFRLASCGVKDETQIHTHMCYSEFNDIIEAIAALDADVITIESSRSEMEILKSF-EKFAYPNDIGPGIYDIHSPRIPRVAEIEE 710
[Close]
BLAST of CX300104 vs. ExPASy Swiss-Prot
Match: METE_BACCN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=metE PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.371e-49
Identity = 94/162 (58.02%), Postives = 119/162 (73.46%), Query Frame = 2 
Query:   11 GPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEQDFYLKWAVHSFRITN*GVQDTTQVHTHMCYSNFNDIIHSIMDMDADVITIENSRSDEKLLSVFREGVKYRAGIGPGVYDIHSPRIPSTEEIADRINKMLAV 496
            GPVTILNWSFVRND PR E CYQIALA++ E+E LE +GI +IQ+DE ALREG+PL++ + D Y++WAV SFR+    V + TQ+HTHMCYSNF DI+ +I  +DADVI+IE SRS  + +    E   Y  GIG GVYDIHSPR+PS EE+   + + L V
Sbjct:  558 GPVTILNWSFVRNDLPRKEVCYQIALALRHEIERLESSGIRIIQVDEPALREGMPLKEKDWDSYIEWAVQSFRLATASVANETQIHTHMCYSNFEDIVDAIRALDADVISIETSRSHGEFIHTL-EQTTYEKGIGLGVYDIHSPRVPSKEEMYTIVEQSLKV 718
The following BLAST results are available for this feature:
BLAST of CX300104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
METE_RHILO6.154e-5063.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALPJ8.038e-5060.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEU1.050e-4960.745-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEH1.050e-4960.745-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB11.050e-4962.995-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBU1.371e-4962.995-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBR1.371e-4962.995-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXBN1.371e-4962.995-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_COXB21.371e-4962.995-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACCN1.371e-4958.025-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC07006B05SK SaltLeaf1 Citrus clementina cDNA clone C07006B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300104 ID=CX300104; Name=CX300104; organism=Citrus clementina; type=EST; length=507bp
GCACGAGGCTGGCCCTGTCACCATTTTGAACTGGTCATTTGTTCGAAATG
ATCAGCCCAGATTCGAGACCTGCTATCAGATTGCATTGGCAATCAAGGAT
GAAGTTGAGGATCTTGAGAAAGCTGGTATCACTGTCATCCAGATTGATGA
GGCTGCTTTACGAGAGGGATTACCACTCAGGAAGTCTGAGCAGGACTTTT
ATCTGAAATGGGCTGTGCACTCCTTTAGGATTACTAACTGAGGTGTTCAA
GACACTACCCAGGTCCATACCCACATGTGCTATTCAAACTTCAACGATAT
CATCCACTCAATTATGGACATGGACGCAGATGTGATCACTATTGAGAACT
CTAGATCCGATGAAAAGCTTCTCTCAGTCTTCCGTGAGGGAGTGAAGTAT
CGCGCTGGCATTGGTCCCGGTGTGTACGACATCCACTCTCCGAGGATCCC
ATCGACAGAAGAAATTGCCGATCGCATCAACAAGATGCTTGCAGTTCTTG
AGAGCAA
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