CX300138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.340e-24 Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC C+K A G G+ AAG+PS CGV +PY IS S DCS++R Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.340e-24 Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC C+K A G G+ AAG+PS CGV +PY IS S DCS++R Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAG---GLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 6.807e-24 Identity = 50/94 (53.19%), Postives = 63/94 (67.02%), Query Frame = 3 Query: 27 NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 +AITCGQV + L C+ + R GG PP CC+GVR+LN A+TTPDRQ ACNCLK G+ + AG+P +CGV IPY I TDC++VR Sbjct: 21 SAITCGQVDSDLTSCLGYARKGGVIPPG-CCAGVRTLNNLAKTTPDRQTACNCLKSLVNPSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.517e-23 Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 ++ +A +AI+CGQVT+ L PC +L GG PP CC+GVR LN AA+TTPDRQ AC CLK I N A LP +CG+ I YKI+P+ DCS++ Sbjct: 16 MVFSASYADAISCGQVTSGLVPCFGYLAAGGPVPPA-CCNGVRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.517e-23 Identity = 51/101 (50.50%), Postives = 68/101 (67.33%), Query Frame = 3 Query: 3 ILVTAPVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 ++V AP+ AITCG V + LAPCI +L+ G P CC G++SLN AA + DR+ AC CLK A +I+GI AA LP QCGV +PY ISP+T+C+ + Sbjct: 17 MMVAAPLAEAITCGLVASKLAPCIGYLQ-GAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.517e-23 Identity = 48/92 (52.17%), Postives = 67/92 (72.83%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 AI+CGQV+++L+PCI + R G PP CCSGV+ L GAA++T D+QAAC CLK +I+GI +G+P +CGV +P+ IS STDC++V Sbjct: 26 AISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.981e-23 Identity = 55/107 (51.40%), Postives = 74/107 (69.16%), Query Frame = 3 Query: 3 ILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLK---RAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V P+T+ A++CG V ++LA CI ++ GG PP CCSGV++LN A+TTPDRQ ACNC++ RA G+ G+ AAG+P CGV IPYKIS ST+C VR Sbjct: 15 MIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPA-CCSGVKNLNSIAKTTPDRQQACNCIQGAARALGS--GLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.378e-23 Identity = 51/93 (54.84%), Postives = 65/93 (69.89%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNC-LKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 305 AI+CGQV++++ PC+ + R G P C SGVRSLN AARTT DR+AACNC LK A + G+ A+ +P +CGVR+PY IS S DCSRV Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTP3_PRUDU (Non-specific lipid-transfer protein 3 OS=Prunus dulcis PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23 Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 3 Query: 30 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPN--VAAGLPSQCGVRIPYKISPSTDCSRVR 308 A++CGQV +L PCI ++ GG P CC+GVRSL A+TT DRQ+ CNCLK+A I N +AAGLP +CGV IPYKISPSTDC ++ Sbjct: 30 AVSCGQVVNNLTPCINYVANGGALNPS-CCTGVRSLYSLAQTTADRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDCKSIK 123
BLAST of CX300138 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.860e-22 Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 3 Query: 3 ILVTAPVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 308 ++V P+T+ A++CG V+ +APCI +L P CCSGV SLN ARTTPDRQ AC CL A + I AAGLP CGV IPYKIS +T+C+ V+ Sbjct: 15 MIVAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118 The following BLAST results are available for this feature:
BLAST of CX300138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300138 ID=CX300138; Name=CX300138; organism=Citrus clementina; type=EST; length=546bpback to top |