CX300183

Overview
NameCX300183
Unique NameCX300183
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length423
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRIH1_XENLA (Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.158e-14
Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQMLL 362
            K ++YQNKRGG+V LQ I  P    +  E  + L AM+                HK+A+   D QL DF+ESEYL EQV+A+K++ +Y+  L+R+G    G G + FD+  L
Sbjct:   65 KFLKYQNKRGGRVVLQDIKKP----ERDEWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLESEYLEEQVKAMKELGDYITNLKRLGVPQNGMGEYLFDKHTL 172          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRIH1_SCHMA (Ferritin-1 heavy chain OS=Schistosoma mansoni GN=SCM-1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.221e-13
Identity = 41/112 (36.61%), Postives = 57/112 (50.89%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGE 371
            KLM YQN RGG++ LQ I  P            L+AM+                  V  ++ D    DF+ +EYL  QV+++KK+S+Y+  L RVG G G + FD+  LHGE
Sbjct:   64 KLMTYQNMRGGRIVLQDISAP----PQLSWNSGLHAMQDALDLEKKVNQSLMELVAVGERHRDTHFCDFINNEYLEIQVQSMKKLSDYITNLIRVGNGLGEYTFDKETLHGE 171          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRI2_RANCA (Ferritin, middle subunit OS=Rana catesbeiana PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 1.221e-13
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQ 353
            K M+YQNKRGG+V LQ I  P    +  E G+ L AM+                HK+A    D  L DF+ESEYL EQV+ IK+I +++  L+R+G    G G + FD+
Sbjct:   65 KFMKYQNKRGGRVVLQDIKKP----ERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEEQVKDIKRIGDFITNLKRLGLPENGMGEYLFDK 169          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRIH2_XENLA (Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.595e-13
Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQMLL 362
            K ++YQNKRGG+V LQ I  P    +  E G+ L A +                HK+A+   D  L DF+ESEYL EQV+A+K++ +Y+  L+R+G    G G + FD+  L
Sbjct:   65 KFLKYQNKRGGRVVLQDIKKP----ERDEWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLESEYLEEQVKAMKQLGDYITNLKRLGVPQNGMGEYLFDKHTL 172          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRIH_ECHGR (Ferritin heavy chain OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.553e-13
Identity = 45/113 (39.82%), Postives = 57/113 (50.44%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQMLLHGEE 374
            KLM YQ  RGG++  Q I  P +     E    L AME                  VANKN+D Q  +F+E E+L EQV  IKK++ YV  L+R G G G + FD+  L G E
Sbjct:   64 KLMRYQCGRGGRIVYQDIAKPQT----TEWASGLEAMEMALKIEREVNESLLALRGVANKNNDSQFCEFLEGEFLGEQVSDIKKLAGYVTNLKRCGPGLGEYIFDKETLQGGE 172          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRI1_RANCA (Ferritin, higher subunit OS=Rana catesbeiana PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 7.915e-13
Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQ 353
            KLM+ QNKRGG++ LQ +  P    +  E G+ L AM+                HKV +   D  L DF+E+EYL EQV++IK++ +Y+  L+R+G    G G + FD+
Sbjct:   65 KLMKDQNKRGGRIVLQDVKKP----ERDEWGNTLEAMQAALQLEKTVNQALLDLHKVGSDKVDPHLCDFLETEYLEEQVKSIKQLGDYITNLKRLGLPQNGMGEYLFDK 169          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRIH_RABIT (Ferritin heavy chain (Fragment) OS=Oryctolagus cuniculus GN=FTH1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12
Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQMLL 362
            KLM+ QN+RGG++ LQ I  P  E+D  E G  L AME                HK+A   +D  L DF+E+ YL+EQV++IK++ ++V  LR++G    G   + FD+  L
Sbjct:   50 KLMKLQNQRGGRIFLQDIKKP--EYDDWESG--LNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKSIKELGDHVTNLRKMGAPESGMAEYLFDKHTL 157          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRIH_PAGBE (Ferritin, heavy subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.130e-12
Identity = 39/112 (34.82%), Postives = 63/112 (56.25%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQMLL 362
            KL+++QN+RGG++ LQ +  P    D  E G  L A+E                HKV ++++D  + DF+E+ YL EQV++IK++ ++V  LRR+G    G   + FD+  L
Sbjct:   65 KLLKFQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVKSIKELGDWVTNLRRLGAPQNGMAEYLFDKHTL 172          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRIH_BOVIN (Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 5.130e-12
Identity = 42/116 (36.21%), Postives = 64/116 (55.17%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRV---GQGHGVWHFDQMLL-HGE 371
            +LM+ QN+RGG++ LQ I  P    D  +  + L AME                HK+A + +D  L DF+E+ YL+EQVEAIK++ +++  LR++   G G   + FD+  L H E
Sbjct:   69 RLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECALCLERSVNQSLLELHKLATEKNDPHLCDFIETHYLNEQVEAIKELGDHITNLRKMGAPGSGMAEYLFDKHTLGHSE 180          
BLAST of CX300183 vs. ExPASy Swiss-Prot
Match: FRIH_TRENE (Ferritin, heavy subunit OS=Trematomus newnesi PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.700e-12
Identity = 40/112 (35.71%), Postives = 62/112 (55.36%), Query Frame = 3
Query:   36 KLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVAQLRRVG---QGHGVWHFDQMLL 362
            KLM+ QN+RGG++ LQ +  P    D  E G  L A+E                HKV ++++D  + DF+E+ YL EQV++IK++ ++V  LRR+G    G   + FD+  L
Sbjct:   65 KLMKQQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVKSIKELGDWVTNLRRLGAPQNGMAEYLFDKHTL 172          
The following BLAST results are available for this feature:
BLAST of CX300183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
FRIH1_XENLA7.158e-1439.29Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2[more]
FRIH1_SCHMA1.221e-1336.61Ferritin-1 heavy chain OS=Schistosoma mansoni GN=S... [more]
FRI2_RANCA1.221e-1340.37Ferritin, middle subunit OS=Rana catesbeiana PE=1 ... [more]
FRIH2_XENLA1.595e-1338.39Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1[more]
FRIH_ECHGR3.553e-1339.82Ferritin heavy chain OS=Echinococcus granulosus PE... [more]
FRI1_RANCA7.915e-1337.61Ferritin, higher subunit OS=Rana catesbeiana PE=1 ... [more]
FRIH_RABIT3.008e-1238.39Ferritin heavy chain (Fragment) OS=Oryctolagus cun... [more]
FRIH_PAGBE5.130e-1234.82Ferritin, heavy subunit OS=Pagothenia bernacchii P... [more]
FRIH_BOVIN5.130e-1236.21Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV... [more]
FRIH_TRENE6.700e-1235.71Ferritin, heavy subunit OS=Trematomus newnesi PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC07007B11SK SaltLeaf1 Citrus clementina cDNA clone C07007B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300183 ID=CX300183; Name=CX300183; organism=Citrus clementina; type=EST; length=423bp
AGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAATTGATGGAATAT
CAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAATATTGATGCCTCT
CTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGTATGCCATGGAGC
TTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTCCTCAACTTGCAC
AAGGTGGCCAACAAGAACCATGATGTGCAGTTGGCAGATTTCGTTGAAAG
CGAGTATTTACATGAGCAGGTAGAAGCCATCAAAAAGATATCTGAATATG
TTGCTCAGCTGAGAAGAGTTGGCCAGGGGCATGGTGTCTGGCACTTTGAT
CAAATGCTGCTCCATGGGGAGGAAGTCGTCGCATGATGGTGGACACATCT
TGCTTGTCACCTGACTATCCCTA
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