CX300239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF_BRANA (Profilin OS=Brassica napus PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.916e-40 Identity = 75/102 (73.53%), Postives = 85/102 (83.33%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 306 G VWAQS NFPQ K +E IM DF+EPG LAPTGL+L G KYMVIQGEPGAVIRGKKG GG+TIKKT + + GIY+EP+TPGQCNM+VERLGDYLI+Q L Sbjct: 33 GSVWAQSANFPQFKGQEFANIMKDFDEPGHLAPTGLFLAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNMVVERLGDYLIEQDL 134
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF1_ARTVU (Profilin-1 OS=Artemisia vulgaris PE=1 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 4.330e-39 Identity = 72/102 (70.59%), Postives = 85/102 (83.33%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 306 G VWA+S +FP+ KP EI I+ +FNE G LAPTGL+LGG KYMVIQGE GAVIRGKKG GG+ IKKT A++ GIYDEP+ PGQCNM+VERLGDYL+DQG+ Sbjct: 32 GTVWAKSASFPEFKPNEIDAIIKEFNEAGQLAPTGLFLGGAKYMVIQGEAGAVIRGKKGAGGICIKKTGQAMVFGIYDEPVAPGQCNMVVERLGDYLLDQGM 133
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF1_DICDI (Profilin-1 OS=Dictyostelium discoideum GN=proA PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.020e-16 Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 303 G VWA+S KPE GI F P + G +GG KYM I+G+P ++ GKKG G + +T A+I+GIYD+ + PG +IVE+LGDYL D G Sbjct: 27 GGVWAKSSGINITKPEG-DGIAALFKNPAEVFAKGALIGGVKYMGIKGDPQSIY-GKKGATGCVLVRTGQAIIVGIYDDKVQPGSAALIVEKLGDYLRDNG 125
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF_BRABE (Profilin OS=Branchiostoma belcheri PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.944e-16 Identity = 41/102 (40.20%), Postives = 64/102 (62.75%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 306 G +WA+S +L +E+ + F++ LA G+ +GGTKY+ + G+ +IRGKK GV I KT A+++ +Y EP+ P QC ++VE+LGD+LI L Sbjct: 27 GSIWAKSNGL-ELSQDEVATLARSFSKDEVLAANGIRIGGTKYIYLSGDD-KLIRGKKDRQGVHIVKTKTAMVMALYAEPILPEQCAVVVEKLGDWLIQNDL 126
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF_APIME (Profilin OS=Apis mellifera PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.657e-14 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 303 G +WA+SE F ++ EE+T ++ F E L +G+ L G +Y+ + G VIR K G GV KT+ A+++ +Y++P+ P Q +VE+LGDYL+ G Sbjct: 27 GNLWAKSEGF-EVSKEELTKLVQGFEEQDILTSSGVTLAGNRYIYLSGTD-RVIRAKLGKVGVHCMKTTQAVVVSLYEDPIQPQQAASVVEKLGDYLVSCG 125
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF_DROME (Profilin OS=Drosophila melanogaster GN=chic PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.821e-14 Identity = 40/101 (39.60%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 303 G +WAQS F K EE++ +++ F++ L G+ L G +Y+ + G V+R K G GV KT+ A+I+ IY++P+ P Q +VE+LGDYLI G Sbjct: 27 GNIWAQSSGFEVTK-EELSKLISGFDQQDGLTSNGVTLAGQRYIYLSGTD-RVVRAKLGRSGVHCMKTTQAVIVSIYEDPVQPQQAASVVEKLGDYLITCG 125
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF2_ACACA (Profilin-2 OS=Acanthamoeba castellanii PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 1.832e-13 Identity = 40/101 (39.60%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 303 G WA S F + P + N F + + G L GT+Y+ I+ + +V GKKG GV KTS A++IG+Y+E + PG +VE+L DYLI QG Sbjct: 27 GNTWATSAGFA-VSPANGAALANAFKDATAIRSNGFELAGTRYVTIRADDRSVY-GKKGSAGVITVKTSKAILIGVYNEKIQPGTAANVVEKLADYLIGQG 125
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF_BOMMO (Profilin OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.393e-13 Identity = 39/101 (38.61%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 303 G VWA+SE F ++ +E+ I+ F L G+ + GT+Y+ + G +IR K G GV KT A++I +Y+EP+ P Q +VE+LG+YLI G Sbjct: 27 GNVWAKSEGF-EISKDEVAKIVAGFENESLLTSGGVTIAGTRYIYLSGTDH-IIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVVEKLGEYLITCG 125
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF1_PHYPO (Profilin-A OS=Physarum polycephalum GN=PROA PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.393e-13 Identity = 40/101 (39.60%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 303 G VWA S+N LK E I+N F + ++ G+++ G KY+ I+ + ++ GKKG GGV + KT +++IG Y+E + PGQ +VE+L DYL + G Sbjct: 27 GNVWA-SKNL-SLKAGEGAKIVNGFKDSASVLSGGIFVDGQKYLTIKADDKSIY-GKKGAGGVVLVKTGQSVLIGHYNETIQPGQATTVVEKLADYLRENG 124
BLAST of CX300239 vs. ExPASy Swiss-Prot
Match: PROF2_DICDI (Profilin-2 OS=Dictyostelium discoideum GN=proB PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.025e-12 Identity = 38/99 (38.38%), Postives = 54/99 (54.55%), Query Frame = 1 Query: 1 GKVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLID 297 G VWA S F + + IT + F + G TG+++ G KYM I+ + + GK G GGV KT +I+ +YD+ + PG I E+L DYLID Sbjct: 27 GSVWAHSAGFNVAEGKAITAL---FQKDGAAFATGIHVAGKKYMAIKSDTRSAY-GKLGAGGVVCVKTLTCIIVAVYDDKLQPGAAANIAEKLADYLID 121 The following BLAST results are available for this feature:
BLAST of CX300239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300239 ID=CX300239; Name=CX300239; organism=Citrus clementina; type=EST; length=541bpback to top |