CX300246

Overview
NameCX300246
Unique NameCX300246
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length506
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.252e-18
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 2
Query:    2 ATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESE-EAKKGMFVKGYTY 247
            ATLNLNA+NQ  G  PW ++FSY RALQ +CL  W G+ EN+ AAQ+ LL RA+ NSLA +GKYTG+  ++  A + +FV  ++Y
Sbjct:  282 ATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.635e-18
Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = 2
Query:    2 ATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGE-SEEAKKGMFVKGYTY 247
            A++NLNA+NQ  G  PW +SFS+ RALQ + LK WGG+ ENVKAAQD LLTRAKANS A LG Y G       A + + VK Y Y
Sbjct:  275 ASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATLGTYKGASNLGAGASESLHVKDYKY 359          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.026e-17
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 2
Query:    2 ATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            AT NLNA+N  Q   PW ++FSY RALQ + LK WGG+ EN+ AAQ TLL R+KAN  A LGKY GE  +  A + +FV  ++Y
Sbjct:  283 ATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.258e-17
Identity = 45/84 (53.57%), Postives = 53/84 (63.10%), Query Frame = 2
Query:    2 ATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            ATLNLNAMN  +   PW +SFSY RALQ + LK W G+ ENV  AQ+  L RAK NS A LGKY G     +A + + VK Y Y
Sbjct:  274 ATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATLGKYQGGAGGADASESLHVKDYKY 357          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 8.969e-17
Identity = 46/84 (54.76%), Postives = 54/84 (64.29%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            ATLNLNAMN+     PW +SFS+ RALQ + LKTW G+ ENV  AQD  L R KANS A LGKY G   +  A + + VK Y Y
Sbjct:  274 ATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGLASESLHVKDYKY 357          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.530e-16
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGES-EEAKKGMFVKGYTY 247
            A++NLNA+N+ P   PW ++FSY RALQ + LK WGG+ EN+KAAQ+  + RA ANSLA  GKYT  G+S   A + +F+  + Y
Sbjct:  280 ASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.530e-16
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGES-EEAKKGMFVKGYTY 247
            A++NLNA+N+ P   PW ++FSY RALQ + LK WGG+ EN+KAAQ+  + RA ANSLA  GKYT  G+S   A + +F+  + Y
Sbjct:  280 ASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF_PLAFA (Fructose-bisphosphate aldolase OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.998e-16
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 2
Query:    2 ATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            A++NLN++N  GP+PW ++FSY RALQ + L TW G+ ENV  A++ LL RA+ANSLA  GKY G    E A   ++ K Y Y
Sbjct:  287 ASVNLNSINALGPHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAGGENAGASLYEKKYVY 369          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF_PLAF7 (Fructose-bisphosphate aldolase OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0425 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.998e-16
Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 2
Query:    2 ATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            A++NLN++N  GP+PW ++FSY RALQ + L TW G+ ENV  A++ LL RA+ANSLA  GKY G    E A   ++ K Y Y
Sbjct:  287 ASVNLNSINALGPHPWALTFSYGRALQASVLNTWQGKKENVAKAREVLLQRAEANSLATYGKYKGGAGGENAGASLYEKKYVY 369          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGES-EEAKKGMFVKGYTY 247
            A++NLNA+N+ P   PW ++FSY RALQ + LK WGG+ EN+KAAQ+  + RA ANSLA  GKYT  G++   A + +FV  + Y
Sbjct:  280 ASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
The following BLAST results are available for this feature:
BLAST of CX300246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ALF1_CAEEL1.252e-1852.94Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALF2_PEA1.635e-1857.65Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_CAEEL4.026e-1753.57Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALF_SPIOL5.258e-1753.57Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA8.969e-1754.76Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALDOA_RAT1.530e-1650.59Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALDOA_MOUSE1.530e-1650.59Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALF_PLAFA1.998e-1650.60Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALF_PLAF71.998e-1650.60Fructose-bisphosphate aldolase OS=Plasmodium falci... [more]
ALDOA_PONAB3.408e-1650.59Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]

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Properties
Property NameValue
Genbank descriptionC07007H04SK SaltLeaf1 Citrus clementina cDNA clone C07007H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300246 ID=CX300246; Name=CX300246; organism=Citrus clementina; type=EST; length=506bp
GGCAACCCTCAACTTGAACGCCATGAACCAAGGTCCCAACCCATGGCACG
TATCTTTCTCTTATGCCAGAGCTCTCCAAAACACCTGCCTGAAGACATGG
GGTGGCAGGCCAGAGAATGTCAAGGCAGCTCAGGATACTCTGCTCACCCG
TGCCAAGGCCAACTCACTTGCTCAGCTCGGCAAGTACACTGGCGAGGGAG
AATCAGAGGAGGCCAAGAAAGGAATGTTCGTCAAGGGATACACCTACTAA
ATTTGTTAGCACGAAGATCATAAGAATGGTGAAGAAATTTGAAATGAGTA
GTCATCTCAAATGTGTTAATGCTTTATAGCCGTGCTTTGGAGACTATTTT
TGTTCATGATTACATGTACTTTTAGCAACTTAATAAACTTCTTGCCAATG
AGATGAGTTAGTGTGTATTTATGATGAGATTAAGTTCTCTGTACTTTTAT
GTGCATCGTATCTTATACTGCTTTAGTTTACAGTCCAAAAAAAAAAAAAA
AAAAAA
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