CX300246

Overview
NameCX300246
Unique NameCX300246
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length506
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGES-EEAKKGMFVKGYTY 247
            A++NLNA+N+ P   PW ++FSY RALQ + LK WGG+ EN+KAAQ+  + RA ANSLA  GKYT  G++   A + +FV  + Y
Sbjct:  280 ASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 3.408e-16
Identity = 43/85 (50.59%), Postives = 59/85 (69.41%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGES-EEAKKGMFVKGYTY 247
            A++NLNA+N+ P   PW ++FSY RALQ + LK WGG+ EN+KAAQ+  + RA ANSLA  GKYT  G++   A + +FV  + Y
Sbjct:  280 ASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 4.451e-16
Identity = 42/85 (49.41%), Postives = 59/85 (69.41%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGES-EEAKKGMFVKGYTY 247
            A++NLNA+N+ P   PW ++FSY RALQ + LK WGG+ EN+KAAQ+  + RA ANSLA  GKYT  G++   A + +F+  + Y
Sbjct:  280 ASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.295e-15
Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 2
Query:    2 ATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            AT NLNA+N+  G  PW +SFS+ RALQ + +  W G+PENVKA Q   L  AKAN  A LGK+ GE ++   +K +FV  + Y
Sbjct:  280 ATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAGQKSLFVANHAY 363          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOB_DANRE (Fructose-bisphosphate aldolase B OS=Danio rerio GN=aldob PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.209e-15
Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 247
            A+LNLNAMNQ     PW +SFSY RALQ + L  W G+  N KA+QD  +TRAK NSLA  G+Y   G++ +A  + +F   YTY
Sbjct:  280 ASLNLNAMNQLSLHRPWKLSFSYGRALQASALSAWKGQAANKKASQDAFVTRAKINSLASKGEYKPSGQAGQASTQSLFTASYTY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.885e-15
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 2
Query:    2 ATLNLNAMNQ-GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            A++NLN++N  GP+PW ++FSY RALQ + L TW G+ ENV  A+  LL RA+ANSLA  GKY G      A   ++ K Y Y
Sbjct:  276 ASINLNSINVLGPHPWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAGGSTAGASLYEKKYVY 358          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 2.885e-15
Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 247
            ATLNLNA+N  P   PW +SFSY RALQ + L  WGG+ EN KA Q+  + RA ANS A  G+Y   G S+ A  + +F   YTY
Sbjct:  280 ATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSDSASTQSLFTASYTY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.768e-15
Identity = 43/85 (50.59%), Postives = 54/85 (63.53%), Query Frame = 2
Query:    2 ATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGE-SEEAKKGMFVKGYTY 247
            ATLNLNAMN+     PW +SFS+ RALQ + LK W G+ EN++ A+   LTR KANS A LG Y G+    E A + + VK Y Y
Sbjct:  274 ATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 4.922e-15
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESE-EAKKGMFVKGYTY 247
            A+LNLNAMNQ P   PW ++FSY RALQ + L  W G+ EN KAAQ+    RA+ NSLA  G+Y   G+++  A + +F   YTY
Sbjct:  280 ASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 8.395e-15
Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 247
            ATLNLNAMN+     PW ++FS+  ALQ + +K W G+PENV  AQ   LTR KAN  A LGKYTG    + A  + + V GY Y
Sbjct:  274 ATLNLNAMNKLDVLKPWTLTFSFGGALQQSAIKAWAGKPENVAKAQAKFLTRCKANKDATLGKYTGWASGDSAAFENLVVIGYRY 358          
The following BLAST results are available for this feature:
BLAST of CX300246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ALDOA_PANTR3.408e-1650.59Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDOA_HUMAN3.408e-1650.59Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALDOA_RABIT4.451e-1649.41Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]
ALF_ECHMU1.295e-1548.81Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALDOB_DANRE2.209e-1550.59Fructose-bisphosphate aldolase B OS=Danio rerio GN... [more]
ALF2_PLABA2.885e-1549.40Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALDOB_SHEEP2.885e-1550.59Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALF_ORYSJ3.768e-1550.59Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALDOB_CHICK4.922e-1549.41Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALF_ARATH8.395e-1550.59Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionC07007H04SK SaltLeaf1 Citrus clementina cDNA clone C07007H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300246 ID=CX300246; Name=CX300246; organism=Citrus clementina; type=EST; length=506bp
GGCAACCCTCAACTTGAACGCCATGAACCAAGGTCCCAACCCATGGCACG
TATCTTTCTCTTATGCCAGAGCTCTCCAAAACACCTGCCTGAAGACATGG
GGTGGCAGGCCAGAGAATGTCAAGGCAGCTCAGGATACTCTGCTCACCCG
TGCCAAGGCCAACTCACTTGCTCAGCTCGGCAAGTACACTGGCGAGGGAG
AATCAGAGGAGGCCAAGAAAGGAATGTTCGTCAAGGGATACACCTACTAA
ATTTGTTAGCACGAAGATCATAAGAATGGTGAAGAAATTTGAAATGAGTA
GTCATCTCAAATGTGTTAATGCTTTATAGCCGTGCTTTGGAGACTATTTT
TGTTCATGATTACATGTACTTTTAGCAACTTAATAAACTTCTTGCCAATG
AGATGAGTTAGTGTGTATTTATGATGAGATTAAGTTCTCTGTACTTTTAT
GTGCATCGTATCTTATACTGCTTTAGTTTACAGTCCAAAAAAAAAAAAAA
AAAAAA
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