CX300246

Overview
NameCX300246
Unique NameCX300246
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length506
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 73.1738 bits (178), Expect = 7.858e-13
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            A+LNLNA+N+ P   PW ++FSY RALQ + L  W G+ +N  AA +  + RA+ N LA  G+Y G G+   A + +++  + Y
Sbjct:  280 ASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGDGGAAAQSLYIANHAY 363          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 7.858e-13
Identity = 40/85 (47.06%), Postives = 50/85 (58.82%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 247
            ATLNLNA+N  P   PW +SFSY RALQ + L  WGG+  N +A Q+  + RA AN  A  G+Y   G S  A  + +F   YTY
Sbjct:  280 ATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.026e-12
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 2
Query:    2 ATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            AT NLNAMN+     PW +SFS+ RALQ + LK W G+ EN++ A+   L R KANS A LG Y G+  ++   + + VK Y Y
Sbjct:  274 ATRNLNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTYKGDAAAD--TESLHVKDYKY 355          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.026e-12
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEG-ESEEAKKGMFVKGYTY 247
            A++NLNA+N  P   PW ++FSY RALQ + L  W G+ +N  AA +  + RA+ N LA LGKY G G +S  A + ++V  + Y
Sbjct:   53 ASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.026e-12
Identity = 40/85 (47.06%), Postives = 50/85 (58.82%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 247
            ATLNLNA+N  P   PW +SFSY RALQ + L  WGG+  N +A Q+  + RA AN  A  G+Y   G S  A  + +F   YTY
Sbjct:  280 ATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 72.4034 bits (176), Expect = 1.340e-12
Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            AT+NL+A+N  P   PW ++FSY RALQ + L+ W G+ EN+ A Q+ LL RAKAN  A  GKY   G +      +FV  + Y
Sbjct:  279 ATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVA-GSAGAGSGSLFVANHAY 361          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 2.986e-12
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGE-SEEAKKGMFVKGYTY 247
            A+LNLNA+N+ P   PW ++FSY RALQ + L  W G+ +N  AA +  + RA+ N LA  GKY G GE    A + +++  + Y
Sbjct:  280 ASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 2.986e-12
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEA-KKGMFVKGYTY 247
            A+++LNA+NQ P   PW ++FSY RALQ + L  W G+  N  A Q   +TRAK N LA  G+Y   G +++A ++ ++   Y Y
Sbjct:  280 ASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 3.900e-12
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGE-SEEAKKGMFVKGYTY 247
            A+ NLNA+N+ P   PW ++FSY RALQ + L  W G+ +N +AA +  + RA+ N LA  GKY G GE    A + +++  + Y
Sbjct:  280 ASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.900e-12
Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 2
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAKKGMFVKGYTY 247
            A++NLN++N  P   PW ++FSY RALQ + L  W G   N KAA +  + RA+AN LA  GKY   G    A + ++V  + Y
Sbjct:  280 ASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCGAAGQSLYVANHAY 363          
The following BLAST results are available for this feature:
BLAST of CX300246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ALDOC_MOUSE7.858e-1340.48Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_HUMAN7.858e-1347.06Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]
ALF_MAIZE1.026e-1246.43Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALDOC_CHICK1.026e-1243.53Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]
ALDOB_PONAB1.026e-1247.06Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]
ALF_DROME1.340e-1245.24Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALDOC_MACFA2.986e-1242.35Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOB_SPAAU2.986e-1241.18Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOC_PANTR3.900e-1241.18Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDCB_DANRE3.900e-1241.67Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]

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Properties
Property NameValue
Genbank descriptionC07007H04SK SaltLeaf1 Citrus clementina cDNA clone C07007H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300246 ID=CX300246; Name=CX300246; organism=Citrus clementina; type=EST; length=506bp
GGCAACCCTCAACTTGAACGCCATGAACCAAGGTCCCAACCCATGGCACG
TATCTTTCTCTTATGCCAGAGCTCTCCAAAACACCTGCCTGAAGACATGG
GGTGGCAGGCCAGAGAATGTCAAGGCAGCTCAGGATACTCTGCTCACCCG
TGCCAAGGCCAACTCACTTGCTCAGCTCGGCAAGTACACTGGCGAGGGAG
AATCAGAGGAGGCCAAGAAAGGAATGTTCGTCAAGGGATACACCTACTAA
ATTTGTTAGCACGAAGATCATAAGAATGGTGAAGAAATTTGAAATGAGTA
GTCATCTCAAATGTGTTAATGCTTTATAGCCGTGCTTTGGAGACTATTTT
TGTTCATGATTACATGTACTTTTAGCAACTTAATAAACTTCTTGCCAATG
AGATGAGTTAGTGTGTATTTATGATGAGATTAAGTTCTCTGTACTTTTAT
GTGCATCGTATCTTATACTGCTTTAGTTTACAGTCCAAAAAAAAAAAAAA
AAAAAA
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