CX300246

Overview
NameCX300246
Unique NameCX300246
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length506
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 8.688e-12
Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 2 
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGE-SEEAKKGMFVKGYTY 247
            A+ NLNA+N+ P   PW ++FSY RALQ + L  W G+ +N  AA +  + RA+ N LA  GKY G GE    A + +++  + Y
Sbjct:  280 ASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364
[Close]
BLAST of CX300246 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.605e-11
Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 2 
Query:    2 ATLNLNAMNQGP--NPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQLGKYTGEGESEEAK-KGMFVKGYTY 247
            A++NL+A+N      PW ++FS+ RALQ + LKTW G+ EN  AA +  + RA+ NSLA  GKYT  G+S  A     ++  Y Y
Sbjct:  280 ASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY 364
The following BLAST results are available for this feature:
BLAST of CX300246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
ALDOC_HUMAN8.688e-1241.18Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALDCA_DANRE9.605e-1143.53Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]

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Properties
Property NameValue
Genbank descriptionC07007H04SK SaltLeaf1 Citrus clementina cDNA clone C07007H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300246 ID=CX300246; Name=CX300246; organism=Citrus clementina; type=EST; length=506bp
GGCAACCCTCAACTTGAACGCCATGAACCAAGGTCCCAACCCATGGCACG
TATCTTTCTCTTATGCCAGAGCTCTCCAAAACACCTGCCTGAAGACATGG
GGTGGCAGGCCAGAGAATGTCAAGGCAGCTCAGGATACTCTGCTCACCCG
TGCCAAGGCCAACTCACTTGCTCAGCTCGGCAAGTACACTGGCGAGGGAG
AATCAGAGGAGGCCAAGAAAGGAATGTTCGTCAAGGGATACACCTACTAA
ATTTGTTAGCACGAAGATCATAAGAATGGTGAAGAAATTTGAAATGAGTA
GTCATCTCAAATGTGTTAATGCTTTATAGCCGTGCTTTGGAGACTATTTT
TGTTCATGATTACATGTACTTTTAGCAACTTAATAAACTTCTTGCCAATG
AGATGAGTTAGTGTGTATTTATGATGAGATTAAGTTCTCTGTACTTTTAT
GTGCATCGTATCTTATACTGCTTTAGTTTACAGTCCAAAAAAAAAAAAAA
AAAAAA
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