CX300252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_TOLAT (Biosynthetic arginine decarboxylase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=speA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.112e-13 Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 3 Query: 141 VNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEM 329 VN S+F S+PD W I Q+FPI+P+ LD++P RGV+ D+TCDSDG I +++ G SLP+ EM Sbjct: 464 VNFSLFQSLPDAWGIDQIFPIMPLSGLDQQPTRRGVIMDITCDSDGMIKEYVDGVGIENSLPMPEM 529
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_SHIFL (Biosynthetic arginine decarboxylase OS=Shigella flexneri GN=speA PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 486 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 551
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_SHIF8 (Biosynthetic arginine decarboxylase OS=Shigella flexneri serotype 5b (strain 8401) GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 525
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_SALTY (Biosynthetic arginine decarboxylase OS=Salmonella typhimurium GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 486 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 551
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_SALTI (Biosynthetic arginine decarboxylase OS=Salmonella typhi GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 486 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 551
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_SALSV (Biosynthetic arginine decarboxylase OS=Salmonella schwarzengrund (strain CVM19633) GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 525
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_SALPB (Biosynthetic arginine decarboxylase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 525
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_SALNS (Biosynthetic arginine decarboxylase OS=Salmonella newport (strain SL254) GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 525
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_SALHS (Biosynthetic arginine decarboxylase OS=Salmonella heidelberg (strain SL476) GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 525
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_SALDC (Biosynthetic arginine decarboxylase OS=Salmonella dublin (strain CT_02021853) GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 525 The following BLAST results are available for this feature:
BLAST of CX300252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300252 ID=CX300252; Name=CX300252; organism=Citrus clementina; type=EST; length=332bpback to top |