CX300252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_SALCH (Biosynthetic arginine decarboxylase OS=Salmonella choleraesuis GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 525
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_SALA4 (Biosynthetic arginine decarboxylase OS=Salmonella agona (strain SL483) GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 525
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_ECOSM (Biosynthetic arginine decarboxylase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 525
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_ECOLI (Biosynthetic arginine decarboxylase OS=Escherichia coli (strain K12) GN=speA PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 486 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 551
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_ECOL6 (Biosynthetic arginine decarboxylase OS=Escherichia coli O6 GN=speA PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 486 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 551
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_ECO5E (Biosynthetic arginine decarboxylase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 460 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 525
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_ECO57 (Biosynthetic arginine decarboxylase OS=Escherichia coli O157:H7 GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ E Sbjct: 486 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPE 551
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_CHRVO (Biosynthetic arginine decarboxylase OS=Chromobacterium violaceum GN=speA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13 Identity = 33/68 (48.53%), Postives = 47/68 (69.12%), Query Frame = 3 Query: 135 YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHEM 329 Y N S+F S+PD WAI Q+ PI+P+H L E+P R VL DLTCDSDGK+ +++ +S+ +HE+ Sbjct: 454 YFCNFSVFQSLPDTWAIDQVLPIMPVHRLAEQPTRRAVLQDLTCDSDGKLKQYVDQQSIESSMSVHEV 521
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_YERPE (Biosynthetic arginine decarboxylase OS=Yersinia pestis GN=speA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.048e-12 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 138 HVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPL 320 +VN S+F S+PD W I QLFP++P+ LD+ P R VL D+TCDSDG ID +I G T++P+ Sbjct: 487 YVNFSLFQSMPDAWGIDQLFPVLPLEGLDKPPERRAVLLDITCDSDGTIDHYIDGDGVATTMPM 550
BLAST of CX300252 vs. ExPASy Swiss-Prot
Match: SPEA_KLEP3 (Biosynthetic arginine decarboxylase OS=Klebsiella pneumoniae (strain 342) GN=speA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.369e-12 Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = 3 Query: 36 FKDGTLGIEQLATVDGL----CDFVAKEIGASDPVRT-------------YHVNLSIFTSIPDYWAIGQLFPIVPIHHLDERPGVRGVLSDLTCDSDGKIDKFIGG---GTSLPLHE 326 + GT +++ A + L C V K++ S+ +VN S+F S+PD W I QLFP++P+ L++ P R VL D+TCDSDG ID ++ G T++P+ E Sbjct: 409 YSSGTFNLQERAWAEQLYLNMCHEVQKQLDPSNRAHRPIIDELQERMADKIYVNFSLFQSMPDAWGIDQLFPVMPLEGLNKSPERRAVLLDITCDSDGAIDHYVDGDGIATTMPMPE 525 The following BLAST results are available for this feature:
BLAST of CX300252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300252 ID=CX300252; Name=CX300252; organism=Citrus clementina; type=EST; length=332bpback to top |