CX300349
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP14_ORYSJ (Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica GN=NIP1-4 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.198e-37 Identity = 69/118 (58.47%), Postives = 94/118 (79.66%), Query Frame = 1 Query: 7 LRLLFQEKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYT 360 LRL+F + TLP G++ Q+ V+EF+ITFYLMFVI VATD++A+G +AG+AVG T++LNV+FAGP++GASMNPARS+GPA+V S+Y LW+YI+ P GA AGAW Y+++R T Sbjct: 151 LRLMFGGRHAPVPATLPGGAHAQSLVIEFVITFYLMFVIMAVATDDQAVGHMAGVAVGGTIMLNVLFAGPVSGASMNPARSIGPALVGSKYTALWVYILGPFAGAAAGAWAYSLIRLT 268
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 3.536e-36 Identity = 70/120 (58.33%), Postives = 92/120 (76.67%), Query Frame = 1 Query: 28 KQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITK 387 K D + GT P+ SN +FVMEFI TF LMFVIS VATD RA G AG+A+G+T++L+++F+GPI+GASMNPARSLGPA++ YK LW+YIV+P +GA +GAW Y ++R T K EI + Sbjct: 152 KGDVYVGTYPSNSNTTSFVMEFIATFNLMFVISAVATDKRATGSFAGIAIGATIVLDILFSGPISGASMNPARSLGPALIWGCYKDLWLYIVSPVIGALSGAWTYGLLRSTKKSYSEIIR 271
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP21_ARATH (Aquaporin NIP2-1 OS=Arabidopsis thaliana GN=NIP2-1 PE=2 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.065e-32 Identity = 72/138 (52.17%), Postives = 95/138 (68.84%), Query Frame = 1 Query: 4 TLRLLFQ-------EKQDQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSAS 396 TLRLLF +K D F G+ P+GS++QAFVMEFIIT +LM V+ V T R EL GL +G+TV LNV+FAG ++GASMNPARS+GPA+V YKG+WIY++AP LGA +GA ++ M+ E +K+ S Sbjct: 141 TLRLLFDLNNDVCSKKHDVFLGSSPSGSDLQAFVMEFIITGFLMLVVCAVTTTKRTTEELEGLIIGATVTLNVIFAGEVSGASMNPARSIGPALVWGCYKGIWIYLLAPTLGAVSGALIHKMLPSIQNAEPEFSKTGS 278
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP51_ARATH (Probable aquaporin NIP5-1 OS=Arabidopsis thaliana GN=NIP5-1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.284e-32 Identity = 64/105 (60.95%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 49 TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTD 363 T+P+ S QAF +EFIITF L+FV++ VATD RA+GELAG+AVG+TV+LN++ AGP TG SMNP R+LGPA+ S Y+ LW+Y+VAP LGA +GA VY V+ D Sbjct: 186 TIPSVSLGQAFALEFIITFILLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVASGNYRSLWVYLVAPTLGAISGAAVYTGVKLND 290
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP31_ORYSJ (Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.301e-30 Identity = 62/104 (59.62%), Postives = 78/104 (75.00%), Query Frame = 1 Query: 55 PAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDK 366 P S QAF EFIITF L+FV++ VATD RA+GELAG+AVG+ V LN++ AGP TG SMNP R+LGPA+ + Y+ LWIY++AP LGA AGA VY V+ D+ Sbjct: 195 PTISTAQAFFTEFIITFNLLFVVTAVATDTRAVGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLIAPTLGAVAGAGVYTAVKLRDE 298
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.786e-30 Identity = 59/119 (49.58%), Postives = 84/119 (70.59%), Query Frame = 1 Query: 49 TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLK 405 T P+G + A ++E ++TF +MFV VATD+RA+GELAGLAVGS V + +FAGP++G SMNPAR+L PA+ S+ + GLWIY + P +G +GAWVY +R+ + P + T+ S K Sbjct: 160 TTPSGPHWHALLIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVIGTLSGAWVYTYIRFEEAPAAKDTQRLSSFK 278
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP22_ORYSJ (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.459e-30 Identity = 58/107 (54.21%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 49 TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKP 369 T P G + A V+E ++TF +MFV VATD+RA+GELAGLAVGS V + +FAGP++G SMNPAR+L PA+ S+ Y GLWIY + P +G +GAWVY +R+ + P Sbjct: 160 TTPTGPHWHALVIEIVVTFNMMFVTCAVATDSRAVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVYTGLWIYFLGPVVGTLSGAWVYTYIRFEEAP 266
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.102e-29 Identity = 59/106 (55.66%), Postives = 81/106 (76.42%), Query Frame = 1 Query: 49 TLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDK 366 T+P QAF +EFII+F LMFV++ VATD RA+GELAG+AVG+TV+LN++ AGP T ASMNP R+LGPAI ++ Y+ +W+Y+ AP LGA GA Y +V+ ++ Sbjct: 188 TVPTVGLSQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVKLPEE 293
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.102e-29 Identity = 61/124 (49.19%), Postives = 82/124 (66.13%), Query Frame = 1 Query: 34 DQFAGTLPAGSNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDKPLREITKSASFLK 405 D T P G + + V+E I+TF +MFV VATD RA+GELAGLAVGS V + +FAG I+G SMNPAR+LGPA+ S+++ GLWIY + P +G +GAW Y +R+ D P ++ S K Sbjct: 152 DVIGTTTPVGPHWHSLVVEVIVTFNMMFVTLAVATDTRAVGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNKFDGLWIYFLGPVMGTLSGAWTYTFIRFEDTPKEGSSQKLSSFK 275
BLAST of CX300349 vs. ExPASy Swiss-Prot
Match: NIP31_MAIZE (Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.205e-29 Identity = 60/101 (59.41%), Postives = 77/101 (76.24%), Query Frame = 1 Query: 64 SNIQAFVMEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPITGASMNPARSLGPAIVSSQYKGLWIYIVAPPLGATAGAWVYNMVRYTDK 366 S QAF EFII+F L+FV++ VATD RA+GELAG+AVG+ V LN++ AGP TG SMNP R+LGPA+ + Y+ LWIY++AP LGA AGA VY V+ D+ Sbjct: 189 STAQAFFTEFIISFNLLFVVTAVATDTRAVGELAGIAVGAAVTLNILVAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLLAPTLGALAGASVYKAVKLRDE 289 The following BLAST results are available for this feature:
BLAST of CX300349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300349 ID=CX300349; Name=CX300349; organism=Citrus clementina; type=EST; length=622bpback to top |