CX300380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_KOSOT (50S ribosomal protein L18 OS=Kosmotoga olearia (strain TBF 19.5.1) GN=rplR PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.737e-30 Identity = 64/120 (53.33%), Postives = 87/120 (72.50%), Query Frame = 2 Query: 89 RTKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 R ++E R RH R+R KI GTPERPRL V+RS +H+Y Q+IDD T+ SAST+ K + ++L + E +K+VG++IAK EKGI K+ FDRGG+ +HGRI++LADAARE GL+F Sbjct: 5 RDRKELRRKRHLRVRSKIKGTPERPRLAVYRSERHIYAQIIDDIAGRTIVSASTVDKELREKLTKTWNQ--EAAKEVGKLIAKRAAEKGIKKIVFDRGGFKFHGRIKSLADAAREAGLEF 122
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_BACA2 (50S ribosomal protein L18 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rplR PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.737e-30 Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = 2 Query: 92 TKREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 +K R RH+R+R K+ GT ERPRL VFRSNKH+Y Q+IDD TLASAST+ K ++ E S+G + + KVGE++AK EKG++ V FDRGGY YHGR++ALADAARE GL+F Sbjct: 6 SKNAARQKRHARVRAKLSGTAERPRLNVFRSNKHIYAQIIDDVNGVTLASASTLDKDLNVE---STGDS-AAAAKVGELVAKRASEKGVSDVVFDRGGYLYHGRVKALADAAREAGLKF 120
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_SORC5 (50S ribosomal protein L18 OS=Sorangium cellulosum (strain So ce56) GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 67/114 (58.77%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 107 RTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 R R RIRKK++GTPERPRL VFRS+KH+Y QVIDD TLA AST+ K + LD + +E +KKVG +IA+ C E+ I KV FDR GY YHGR+ ALA AARE GL F Sbjct: 8 RERRKLRIRKKVEGTPERPRLSVFRSSKHIYAQVIDDVSGKTLAHASTLSKDLKGSLDEDN--KVEAAKKVGALIARICKERQIDKVVFDRNGYLYHGRVSALAQAAREAGLDF 119
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_CARHZ (50S ribosomal protein L18 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 66/115 (57.39%), Postives = 82/115 (71.30%), Query Frame = 2 Query: 104 DRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 +R RH R+RKKI GTPERPRL V+RS KH+Y Q+IDD TL +AST+ + ++ Y G IE +K VG +IA+ KGI KV FDRGGY YHGR++ALA+AARE GLQF Sbjct: 10 ERKRRHLRVRKKIHGTPERPRLNVYRSLKHIYAQIIDDVSGRTLVAASTLDPELRGKIGY--GGNIEAAKAVGRLIAERAKAKGIEKVVFDRGGYLYHGRVKALAEAAREGGLQF 122
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_BACHK (50S ribosomal protein L18 OS=Bacillus thuringiensis subsp. konkukian GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 95 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_BACCZ (50S ribosomal protein L18 OS=Bacillus cereus (strain ZK / E33L) GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 95 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_BACCR (50S ribosomal protein L18 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 95 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_BACCQ (50S ribosomal protein L18 OS=Bacillus cereus (strain Q1) GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 95 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_BACC7 (50S ribosomal protein L18 OS=Bacillus cereus (strain AH187) GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 95 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120
BLAST of CX300380 vs. ExPASy Swiss-Prot
Match: RL18_BACC4 (50S ribosomal protein L18 OS=Bacillus cereus (strain B4264) GN=rplR PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.269e-30 Identity = 67/118 (56.78%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 95 KREDRTARHSRIRKKIDGTPERPRLCVFRSNKHLYVQVIDDTKMHTLASASTMQKPISDELDYSSGPTIEVSKKVGEMIAKSCLEKGITKVAFDRGGYPYHGRIQALADAAREYGLQF 448 K R RH+R+R K+ GT ERPRL VFRSN+H+Y QVIDD TL SAST+ K +L + IE + KVGE +AK +EKG+ +V FDRGGY YHGR++ALA+AARE GLQF Sbjct: 7 KNATRKKRHARVRAKLTGTAERPRLNVFRSNQHIYAQVIDDVNGVTLVSASTLDK----DLALNGTSNIEAATKVGESVAKRAVEKGVKEVVFDRGGYLYHGRVKALAEAAREAGLQF 120 The following BLAST results are available for this feature:
BLAST of CX300380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300380 ID=CX300380; Name=CX300380; organism=Citrus clementina; type=EST; length=495bpback to top |