CX300382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300382 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.175e-18 Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 2 Query: 2 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 160 VKEIKNGRLAMF+ GFFVQAIVTGKGP+ENL DHLA+P NNA+AYAT F P Sbjct: 220 VKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272
BLAST of CX300382 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.327e-18 Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 2 Query: 2 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 160 VKEIKNGRLA FSMFGFFVQAIVTGKGP++NL DHLA+P NNA+A+AT F P Sbjct: 199 VKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
BLAST of CX300382 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.841e-17 Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 2 Query: 2 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 163 VKEIKNGRLAMFS GFFVQAIVTGKGP++NL DHLADP N A+A AT F PG Sbjct: 199 VKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
BLAST of CX300382 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.472e-16 Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 2 Query: 2 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 163 VKE+KNGRLAMFSMFGFFVQAIV+ K LENLADHL VNNNA + TNFVPG Sbjct: 214 VKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267
BLAST of CX300382 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.593e-13 Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = 2 Query: 2 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 130 VKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN Sbjct: 223 VKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
BLAST of CX300382 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.365e-12 Identity = 31/43 (72.09%), Postives = 38/43 (88.37%), Query Frame = 2 Query: 2 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 130 +KEIKNGRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN Sbjct: 223 LKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265
BLAST of CX300382 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.156e-11 Identity = 28/43 (65.12%), Postives = 37/43 (86.05%), Query Frame = 2 Query: 2 VKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 130 +KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPVNNN Sbjct: 225 LKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNN 267 The following BLAST results are available for this feature:
BLAST of CX300382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300382 ID=CX300382; Name=CX300382; organism=Citrus clementina; type=EST; length=306bpback to top |