CX300481

Overview
NameCX300481
Unique NameCX300481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length501
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300481 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 75.8702 bits (185), Expect = 1.192e-13
Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 1
Query:    1 IVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 321
            IVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  235 IVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339          
BLAST of CX300481 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 1.192e-13
Identity = 43/107 (40.19%), Postives = 60/107 (56.07%), Query Frame = 1
Query:    1 IVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 321
            IVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  235 IVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339          
BLAST of CX300481 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEEL (DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=dnj-20 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.468e-13
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 1
Query:    7 FVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES-LSPDQCKMLETVLPPRT 330
            F ++ ++HP+F+RKGDDL+   T+SL +AL GF+  I HLDG   ++K Q  +V  P       DEGMP  +    +G L + F V+FP++ LS +Q   +  +L   T
Sbjct:  240 FKIRIQKHPRFERKGDDLYTNVTISLQDALNGFEMEIQHLDGH--IVKVQRDKVTWPGARLRKKDEGMPSLEDNNKKGMLVVTFDVEFPKTELSDEQKAQIIEILQQNT 346          
BLAST of CX300481 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 4.530e-13
Identity = 38/107 (35.51%), Postives = 60/107 (56.07%), Query Frame = 1
Query:    1 IVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 321
            IVF+++ K H  FKR+G DL     +SL +ALCG    +  L G ++ +     E++KP   + IN  G+P+ + P  RG L + F + FP++L+P     L  +LP
Sbjct:  228 IVFIIRDKPHSLFKREGIDLKYTAQISLKQALCGALVSVPTLQGSRIQVNPNH-EIIKPTTTRRINGLGLPVPKEPSRRGDLIVSFDIKFPDTLAPSLQNQLSELLP 333          
BLAST of CX300481 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.916e-13
Identity = 38/106 (35.85%), Postives = 62/106 (58.49%), Query Frame = 1
Query:    1 IVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 318
            I+F++++K HP+F+R+ D+LF  + + L +AL      +  LD R L I     ++V P  FK +  EGMP+ + P  +G L+I F + FP  L+P + +ML   L
Sbjct:  211 IIFIVKEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLDDRLLNIPIN--DIVHPKYFKIVPGEGMPLPENPSKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
BLAST of CX300481 vs. ExPASy Swiss-Prot
Match: DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.009e-12
Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 1
Query:    1 IVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVL 318
            I+F++++K HP+F+R+ D+LF  + + L +AL      +  LD R L I     +++ P  FK +  EGMP+ + P  +G L+I F + FP  L+P + +ML   L
Sbjct:  211 IIFIVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDRLLNIPIN--DIIHPKYFKKVPGEGMPLPEDPTKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
BLAST of CX300481 vs. ExPASy Swiss-Prot
Match: XDJ1_SCHPO (DnaJ protein homolog xdj1 OS=Schizosaccharomyces pombe GN=xdj1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.835e-12
Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 1
Query:    1 IVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF-QFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSVQLTD 348
            ++  L QK HP F+R GDDL  +  +SL EAL GF + ++T LDGR L      G+++ P     I  EGM    +  +RG LY+   ++FP+   +   + ++L  +LP    V + D
Sbjct:  253 VILQLHQKPHPVFERLGDDLKAKLKISLAEALTGFNRVILTTLDGRGLEYVQPIGKILHPGDCLIIPGEGMYKDSKTDLRGDLYLEVDIEFPKDGLIGTTEIEILRDILPSIPKVSVMD 371          
BLAST of CX300481 vs. ExPASy Swiss-Prot
Match: PSI1_SCHPO (Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 5.008e-12
Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = 1
Query:    1 IVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKS----QPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQ 294
            I FVL +K HP F R GDDL ++  LSL EAL GF   I+ +DG++L + S    QPG  +    F      GMP+ + P  RG + I   V FP  L+P Q
Sbjct:  277 IQFVLAEKPHPVFTRSGDDLRMQVELSLKEALLGFSKQISTIDGKKLKVSSSLPTQPGYEITYPGF------GMPLPKNPSQRGNMIIECKVKFPTELTPAQ 372          
BLAST of CX300481 vs. ExPASy Swiss-Prot
Match: DJB11_PONAB (DnaJ homolog subfamily B member 11 OS=Pongo abelii GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.457e-11
Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 1
Query:    7 FVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 300
            F ++  +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  241 FRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of CX300481 vs. ExPASy Swiss-Prot
Match: DJB11_HUMAN (DnaJ homolog subfamily B member 11 OS=Homo sapiens GN=DNAJB11 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.457e-11
Identity = 35/98 (35.71%), Postives = 57/98 (58.16%), Query Frame = 1
Query:    7 FVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 300
            F ++  +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  241 FRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
The following BLAST results are available for this feature:
BLAST of CX300481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
DNJB1_HUMAN1.192e-1340.19DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNJB1_BOVIN1.192e-1340.19DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
DNJ20_CAEEL3.468e-1338.53DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=d... [more]
DNAJ1_DROME4.530e-1335.51DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DJB13_MOUSE5.916e-1335.85DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]
DJB13_HUMAN1.009e-1234.91DnaJ homolog subfamily B member 13 OS=Homo sapiens... [more]
XDJ1_SCHPO3.835e-1234.45DnaJ protein homolog xdj1 OS=Schizosaccharomyces p... [more]
PSI1_SCHPO5.008e-1242.16Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 ... [more]
DJB11_PONAB1.457e-1135.71DnaJ homolog subfamily B member 11 OS=Pongo abelii... [more]
DJB11_HUMAN1.457e-1135.71DnaJ homolog subfamily B member 11 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionC07010F12SK SaltLeaf1 Citrus clementina cDNA clone C07010F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300481 ID=CX300481; Name=CX300481; organism=Citrus clementina; type=EST; length=501bp
ATTGTATTTGTTCTACAACAGAAAGAGCACCCGAAATTTAAGCGAAAGGG
TGATGACCTATTTGTTGAGCACACCCTGTCACTGACAGAAGCTCTCTGTG
GCTTTCAATTTGTAATAACTCATTTGGATGGCCGGCAACTCCTCATCAAA
TCCCAGCCTGGGGAAGTAGTCAAGCCGGACCAATTCAAGGCCATAAATGA
TGAAGGAATGCCTATGTATCAGAGGCCATTTATGAGGGGCAAACTGTACA
TTCATTTCACTGTTGACTTCCCTGAGTCACTGAGCCCAGACCAGTGCAAG
ATGCTGGAGACCGTACTACCTCCAAGGACCTCAGTCCAGCTCACCGATAT
GGAACTGGATGAGTGTGAAGAAACAACCCTGCATGATGTGAACATTGAGG
AGGAAATGCGAAGGAAGCAACAAGCAGCTCAGGAGGCATACGATGAAGAT
GACGATATGCAAGGTGGTGCCCAGAGAGTGCAGTGTGCTCAGCAGTGATG
A
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