CX300573

Overview
NameCX300573
Unique NameCX300573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15
Identity = 61/225 (27.11%), Postives = 104/225 (46.22%), Query Frame = 3
Query:   30 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT-SMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVS 701
            +  G   L+TG   GIG       A  GA V     ++ +    +   K+ G +      D++  +  E++++     F G+L+IL+NNA I       + + ED     + N +  F LS+ A    K  G G IV +SS  G+ GIP   +Y   K A+  LT++LA ++    IR N V P   ++  ++   +  P   E L  +  + P+ R G+ +E++
Sbjct:    2 NFQGKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGDVA--KDAEQIVKKTVETF-GRLDILVNNAGIVPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCPGTTQSEGLMARVKASPNPEELLKKMTSRIPMKRLGKEEEIA 223          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: SOU1_SCHPO (Sorbose reductase sou1 OS=Schizosaccharomyces pombe GN=sou1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15
Identity = 71/235 (30.21%), Postives = 114/235 (48.51%), Query Frame = 3
Query:   27 WSLNGMTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ---GKLNILINNAAIAFVKPTVDITAEDMST-VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSV-SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEG--PEGSEFLDGIARQTPIGRAGEPDEV 698
            +SL G T L+TGG+ GIG +  +  A  G+   +++  ++  +E  A L +    G +     C +   E R  +IET     +   G+L+++I NA IA    +++   ED+ T V   N    ++ +Q A   FK  G GS++F +S+ G +   P   + Y A K A+  L + LA EWA    R N+V+P  I T +    +E    +  E+       TP  R G PDE+
Sbjct:    5 FSLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRD--KHGVQAKAYSCPI---ENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARALAVEWA-PFARVNSVSPGYIDTDLTLYADENLRKKWKEY-------TPQARIGLPDEL 226          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: LINC_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linC PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15
Identity = 71/224 (31.70%), Postives = 101/224 (45.09%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFH-LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSE-FLDGIARQTPIGRAGEPDE 695
            L+G T +VTGG  GIG ATVE L   GA V     N    +A +      G K     CD++  E  + L+    + F G L+   NNAAI     P  +++ E        N    F  +      + +    GSIV  +S  GV G+P    Y   K A+  LT+  A ++ K  IR N + P  ++T M++   +   G E +L+ I    PIGR  EP E
Sbjct:    4 LSGKTIIVTGGGSGIGRATVELLVASGANVPVADINDEAGEAVV---ATSGGKAAYFRCDIAQEEDVKALVAQTLAAFGG-LDGSFNNAAIPQAGLPLAEVSLERFRQSMDINVTGTFLCMKYQILAMIERGTKGSIVNTASAAGVVGVPMHGEYVGAKHAVVGLTRVAAADYGKHGIRVNALVPGAVRTPMLQRAMDNDAGLEPYLNSI---HPIGRFSEPHE 220          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: GRDH2_ARATH (Glucose and ribitol dehydrogenase homolog 2 OS=Arabidopsis thaliana GN=At3g05260 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15
Identity = 80/239 (33.47%), Postives = 113/239 (47.28%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDAR-----LHEWKNKGFKVTGSVC-DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI-KPFEEGPEGSEFLDGIARQTPIGRAGEPDEVS-SLVGILC 722
            L+G  ALVTGG  GIG A     A  GA +  T  + + + DA      LHE K +  K    +  DL   E  ++++E V + F G++++L+N AA        DI    +  V  TN  S F L + A    K     SI+  +SV    G  S+  Y A KGA+   T+ LA + A   IR N VAP  + T +I   F E     E +     +TP+ RA +P EV+ S V + C
Sbjct:   37 LHGKVALVTGGDSGIGKAVCHCYALEGASVAFTYVKGREDKDAEETLRLLHEVKTREAKEPIMIATDLGFEENCKRVVEEVVNSF-GRIDVLVNCAAEQHEVSIEDIDEARLERVFRTNIFSQFFLVKYALKHMKEGS--SIINTTSVVAYAGNSSLLEYTATKGAIVSFTRGLALQLAPKGIRVNGVAPGPVWTPLIPASFSE-----EAIKQFGSETPMKRAAQPVEVAPSYVFLAC 267          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHB8_RAT (Estradiol 17-beta-dehydrogenase 8 OS=Rattus norvegicus GN=Hsd17b8 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.064e-15
Identity = 67/237 (28.27%), Postives = 105/237 (44.30%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-------KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            L    ALVTG   GIG A    LA  GA V  C  +       +    N G        K      D+S     ++L+E V + F    +++++ A I   +  + ++ ED   V + N +  F ++Q A   L  + G GSI+ ISS+ G  G    + Y + K  +  LT+  A E  +  IR N+V P  I T M +   E     +  D +    P+G  G+P++V+ +V  L
Sbjct:    7 LRSALALVTGAGSGIGRAISVRLAAEGAAVAACDLDGAAAQDTVRLLGNPGSEDREPRGKHAAFQADVSEGPAAKRLLEQVQACFFRPPSVVVSCAGITRDEFLLHMSEEDWDRVIAVNLKGTFLVTQAAAQALVSSGGRGSIINISSIVGKVGNIGQTNYASSKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKMPE-----KVKDKVTAMIPLGHMGDPEDVADVVAFL 238          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DCXR_CAEEL (Probable L-xylulose reductase OS=Caenorhabditis elegans GN=dhs-21 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.695e-15
Identity = 71/222 (31.98%), Postives = 109/222 (49.10%), Query Frame = 3
Query:   51 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL-AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPE-GSEFLDGIARQTPIGRAGEPDEVSSLV 710
            LVTG ++GIG      LA+ GA V   +RN+  L + + E  +  + +   V D+S+ E  E L + +   F   ++ L+NNA IA       IT + +    + N      ++QL A         GSIV ISS   +R + + ++Y A K A++ +T+ LA E    NIR N+V P V+ T M +     P+   + LD    + PI R  E DEV + V
Sbjct:   13 LVTGASQGIGKEICLSLAKAGAQVIAFARNEANLLSLVKETTSLRYTIIPIVGDVSANE--EVLFKLIVPHFP--IHGLVNNAGIATNHAIGQITQQSIDRTFAVNVRGPILIAQLVARNFVDRQIKGSIVNISSQAAIRPLDNHTVYCASKAALDMVTRCLANELGSQNIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLD----RMPIKRFAEVDEVVNAV 226          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: VER1_ASPPA (Versicolorin reductase OS=Aspergillus parasiticus GN=ver1 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.520e-15
Identity = 69/237 (29.11%), Postives = 105/237 (44.30%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF--EEGPEGSEFLDG-----IARQTPIGRAGEPDEVSSLVGIL 719
            L+G  ALVTG  RGIG A    L   GA +V   + ++   +  + + K  G        D+   E   KL+      F G L+I+ +NA I       D+T E+   V   N    F +++ A+   +  G   I+  S+   V+G+P  ++Y   KGA++   + +A +     I  N VAP  IKT M      E  P G  F D       A  +P+ R G P +V+ +V  L
Sbjct:    7 LDGKVALVTGAGRGIGAAIAVALGERGAKVVVNYAHSREAAEKVVEQIKANGTDAIAIQADVGDPEATAKLMAETVRHF-GYLDIVSSNAGIVSFGHLKDVTPEEFDRVFRVNTRGQFFVAREAYRHMREGGR-IILTSSNTACVKGVPKHAVYSGSKGAIDTFVRCMAIDCGDKKITVNAVAPGAIKTDMFLAVSREYIPNGETFTDEQVDECAAWLSPLNRVGLPVDVARVVSFL 241          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHB8_CANFA (Estradiol 17-beta-dehydrogenase 8 OS=Canis familiaris GN=HSD17B8 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.520e-15
Identity = 67/237 (28.27%), Postives = 108/237 (45.57%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-------LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            L    ALVTG   GIG A    LA+ GA V  C  ++         L  +  E    G   T    D+S      +L+E V + F    +++++ A +   +  + ++ +D   V + N + +F ++Q A     +SG  GSI+ ISS+ G  G    + Y A K  +  LT+  A E  +  IR N+V P  I T M +   +     + LD +    P+G  G+P++V+  V  L
Sbjct:    7 LRSALALVTGAGSGIGRAVSVRLAKEGATVAACDLDRAAACETVWLLGGQGSEKVAPGGAHTAFQADVSEAGAVRRLLEQVQACFSRPPSVVVSCAGLTRDEFLLRMSEDDWDRVIAVNLKGIFLVTQAAAQALVSSGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFITTPMTQKVPQ-----KVLDKVIGMIPMGHLGDPEDVADAVTFL 238          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: Y452_LISIN (Uncharacterized oxidoreductase Lin0452 OS=Listeria innocua GN=lin0452 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15
Identity = 61/229 (26.64%), Postives = 110/229 (48.03%), Query Frame = 3
Query:   30 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 710
            ++     ++TG + GIG AT   LA  GA +   +R   +L+  +   K    +   +  D++ RE  +KL+E     + GK++ +  NA I    P   +  ++   +   N + V +      P F A  +G I+  SSV G++  P  ++YGA K A+  L + L  E A++  NIRT T+ P  I T +++   +  E  + +  + +Q  +     PD ++S+V
Sbjct:    2 TIKNKVIIITGASSGIGEATAILLAEKGAKLVLAARRVEKLEKIVQTIKASSGEAIFAKTDVTKREDNKKLVELAIERY-GKVDAIFLNAGIMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTATIYPAAINTELLETITD-KETEQGMTNLYKQYGV----TPDRIASIV 224          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: PHBB_RHIME (Acetoacetyl-CoA reductase OS=Rhizobium meliloti GN=phbB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15
Identity = 76/227 (33.48%), Postives = 104/227 (45.81%), Query Frame = 3
Query:   48 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF---KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            ALVTGG+RGIG A    L   G   +  + N    D R   ++ +   +     D+SS +     I  V +   G ++IL+NNA I        +T E    V  TN   VF+++   HPL+   +  G G IV ISS+ G +G      Y A K     LTK LA E A   I  N + P  I T M++   E        + I  Q P+GR GEP+EV+  V  L
Sbjct:    5 ALVTGGSRGIGAAICVALKAAG---YKVAANYAGNDERAKAFEQES-GIPVYKWDVSSYQACVDGIARVEADL-GPVDILVNNAGITRDAMFHKMTPEQWGEVIGTNLTGVFNMT---HPLWSGMRDRGFGRIVNISSINGQKGQMGQVNYSAAKAGDLGLTKALAQEGAAKGITVNAICPGYIGTEMVRAVPE----KVLNERIIPQIPVGRLGEPEEVARCVVFL 219          
The following BLAST results are available for this feature:
BLAST of CX300573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
Y325_THEMA2.064e-1527.11Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
SOU1_SCHPO2.064e-1530.21Sorbose reductase sou1 OS=Schizosaccharomyces pomb... [more]
LINC_PSEPA2.064e-1531.702,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]
GRDH2_ARATH2.064e-1533.47Glucose and ribitol dehydrogenase homolog 2 OS=Ara... [more]
DHB8_RAT2.064e-1528.27Estradiol 17-beta-dehydrogenase 8 OS=Rattus norveg... [more]
DCXR_CAEEL2.695e-1531.98Probable L-xylulose reductase OS=Caenorhabditis el... [more]
VER1_ASPPA3.520e-1529.11Versicolorin reductase OS=Aspergillus parasiticus ... [more]
DHB8_CANFA3.520e-1528.27Estradiol 17-beta-dehydrogenase 8 OS=Canis familia... [more]
Y452_LISIN4.597e-1526.64Uncharacterized oxidoreductase Lin0452 OS=Listeria... [more]
PHBB_RHIME4.597e-1533.48Acetoacetyl-CoA reductase OS=Rhizobium meliloti GN... [more]

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Properties
Property NameValue
Genbank descriptionC07011G12SK SaltLeaf1 Citrus clementina cDNA clone C07011G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300573 ID=CX300573; Name=CX300573; organism=Citrus clementina; type=EST; length=729bp
AAGAGCTCATTCGTAGAAACAAAAGATGGTCTCTCAATGGAATGACTGCT
TTAGTCACTGGAGGAACCCGAGGCATAGGGCATGCTACTGTAGAAGAATT
AGCAAGATTTGGAGCAATTGTTCACACATGTTCACGTAATCAAATTGAGC
TCGATGCACGTTTACATGAATGGAAAAACAAAGGGTTCAAAGTAACGGGG
TCAGTATGTGACCTGTCATCCCGCGAACAGCGTGAGAAGCTAATAGAGAC
TGTCACCTCCATCTTTCAGGGGAAGCTCAACATTCTTATAAACAATGCTG
CAATAGCTTTCGTAAAACCAACGGTGGATATTACAGCTGAGGACATGTCA
ACTGTAAGCAGCACAAATTTCGAGTCTGTTTTTCATCTGTCTCAACTAGC
ACATCCTCTGTTTAAAGCATCAGGGAATGGAAGTATCGTATTTATTTCCT
CTGTTGGGGGCGTTAGAGGAATACCTTCTGTTTCTCTGTATGGTGCATAC
AAAGGAGCCATGAATCAACTAACGAAGAATTTGGCATGCGAGTGGGCAAA
GGATAACATCCGTACTAATACAGTTGCACCCTGGGTTATTAAAACCTCAA
TGATCAAACCTTTTGAGGAAGGTCCTGAAGGAAGTGAATTTCTGGATGGA
ATAGCACGTCAAACACCCATCGGTCGAGCTGGAGAGCCTGATGAGGTTTC
TTCATTGGTGGGCATTCTTTGCCTTCAGC
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