CX300573

Overview
NameCX300573
Unique NameCX300573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 78/232 (33.62%), Postives = 112/232 (48.28%), Query Frame = 3
Query:   48 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ--LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEG------SEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            ALVTG T GIG A    LA  GA    C+R++  L   + E + +GF V G+VCD++   Q    +      + G ++IL+NNA  +    T +I  E    V +TN  SVF +++  L      A   G I+ I+S GG +G+     Y A K  +  LTK L  E A+  I  N V P  ++T M +   E   G       E  D I  + P+GR  E  EV+++V  L
Sbjct:   20 ALVTGATSGIGLAIARRLAALGARTFLCARDEERLAQTVKELRGEGFDVDGTVCDVADPAQIRAYVAAAVQRY-GTVDILVNNAGRSGGGATAEIADELWLDVITTNLTSVFLMTKEVLNAGGMLAKKRGRIINIASTGGKQGVVHAVPYSASKHGVVGLTKALGLELARTGITVNAVCPGFVETPMAERVREHYAGIWQVSEEETFDRITNRVPLGRYVETREVAAMVEYL 250          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DCXR_BOVIN (L-xylulose reductase OS=Bos taurus GN=DCXR PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22
Identity = 80/225 (35.56%), Postives = 118/225 (52.44%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL-AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSE-FLDGIARQTPIGRAGEPDEV 698
            L G  ALVTG  +GIG + V+ L   GA V   SR Q +LD+ + E          +VC DL+  E  E+ +  V     G +++L+NNAA+AF++P +++T E      S N  +V  +SQ+ A  L      G IV +SS    RG+ + S+Y + KGA++ LTK +A E     IR N V P V+ T M +     P+ ++  LD I    P+GR  E + V
Sbjct:    5 LAGRRALVTGAGKGIGRSIVKALHAAGARVVAVSRTQADLDSLVRECPG-----VETVCVDLADWEATEQALGGV-----GPVDLLVNNAAVAFLQPFLEVTKEAYDMSFSVNLRAVIQVSQIVARGLIARGAPGVIVNVSSQASQRGLTNHSVYCSTKGALDTLTKVMAVELGPHKIRVNAVNPTVVMTPMGQAAWSDPQKAKAMLDRI----PLGRFAEVENV 215          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DCXR_MESAU (L-xylulose reductase OS=Mesocricetus auratus GN=DCXR PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.071e-22
Identity = 77/225 (34.22%), Postives = 118/225 (52.44%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL-AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSE-FLDGIARQTPIGRAGEPDEV 698
            L G  ALVTG  +GIG +TV  L   GA V   SR Q +LD+ + E          +VC DL+  E  E+ + +V     G +++L+NNAA+A ++P +++T E      + N  +V  +SQ+ A  +      G+IV +SS    R + + S+Y + KGA++ LTK +A E     IR N V P V+ TSM +     P  ++  LD I    P+G+  E + V
Sbjct:    5 LAGRRALVTGAGKGIGRSTVLALQAAGAHVVAVSRTQADLDSLVSECPG-----VETVCVDLADWEATEQALSSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDMSFNVNLRAVIQVSQIVARGMIARGAPGAIVNVSSQASQRALANHSVYCSTKGALDMLTKMMALELGPHKIRVNAVNPTVVMTSMGRTNWSDPHKAKVMLDRI----PLGKFAEVENV 215          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: PECR_RAT (Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus GN=Pecr PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.623e-22
Identity = 74/234 (31.62%), Postives = 106/234 (45.30%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-----NKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            L    A+VTGG  GIG A   EL   G  V   SR    L A + E +     +   +VT   C++   E+   L+++  + + GK+N L+NNA   F+ P  DITA+    V  TN    F++ +  +  +     GSIV I  +    G P+ +  GA +  +  LTK +A  WA   +R N VAP  I  S       G  G    +      P  R G P+E+S LV  L
Sbjct:   16 LQNQVAVVTGGATGIGKAISRELLHLGCNVVIASRKLDRLTAAVDELRASQPPSSSTQVTAIQCNIRKEEEVNNLVKSTLAKY-GKINFLVNNAGGQFMAPAEDITAKGWQAVIETNLTGTFYMCKAVYNSWMKDHGGSIVNIIVLLN-NGFPTAAHSGAARAGVYNLTKTMALTWASSGVRINCVAPGTI-YSQTAVDNYGELGQTMFEMAFENIPAKRVGLPEEISPLVCFL 246          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: Y182_METEA (Uncharacterized oxidoreductase MexAM1_META1p0182 OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=MexAM1_META1p0182 PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.475e-21
Identity = 74/230 (32.17%), Postives = 114/230 (49.57%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            L G  A+VTG ++GIG A  + LA+ GA +V   + ++   DA +      G K      D+S   Q   L+E     F G+L++L+NN+ +       ++T E    +   N   V   +Q A         GSI+ ISSV     +P+ ++Y   KGA+N ++  LA E A   IR N V+P  + T        G  GSE   G+  QTP+GR+G+PD+++ +V  L
Sbjct:    4 LEGKVAVVTGASKGIGAAIAKALAKDGAAVVVNYASSKAGADAVVEAITAAGGKAIAVQADVSQAVQARGLVEAAVQQF-GRLDVLVNNSGVYEFAAIEEVTEEHYRRIFDVNVLGVLLATQAASK--HLGEGGSIINISSVVTDVLMPTSAVYSGTKGALNAISGVLANELAPRKIRVNVVSPGYVVTE--GTHTAGIAGSEMEAGLVAQTPLGRSGQPDDIAGVVAFL 228          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: CPNA_COMTE (Cyclopentanol dehydrogenase OS=Comamonas testosteroni GN=cpnA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.475e-21
Identity = 73/226 (32.30%), Postives = 111/226 (49.12%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 710
            +N    LVTGG  G+G      LAR GA V+    N+      + E + +G K      D+++       ++T+ +    +L+ L+NNA I  +KP  D + E+   +   N  SVF  ++      + +  G IV +SS+ G+ G P  + Y A KGA+   TK  A + A  NIR N+V P VI T M +   + P+ +  L G    T +GRA +P EVS  V
Sbjct:    4 VNDKVVLVTGGAMGMGLTHCTLLAREGATVYLSDMNEELGHQAVAEIRRQGGKAHFLHLDVTNENHWTGAVDTILAE-SDRLDALVNNAGILTLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQILDAPQSARALLG---PTLLGRAAQPMEVSQAV 225          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: CPNA_COMS9 (Cyclopentanol dehydrogenase OS=Comamonas sp. (strain NCIMB 9872) GN=cpnA PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.475e-21
Identity = 73/226 (32.30%), Postives = 111/226 (49.12%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 710
            +N    LVTGG  G+G      LAR GA V+    N+      + E + +G K      D+++       ++T+ +    +L+ L+NNA I  +KP  D + E+   +   N  SVF  ++      + +  G IV +SS+ G+ G P  + Y A KGA+   TK  A + A  NIR N+V P VI T M +   + P+ +  L G    T +GRA +P EVS  V
Sbjct:    4 VNDKVVLVTGGAMGMGLTHCTLLAREGATVYLSDMNEELGHQAVAEIRRQGGKAHFLHLDVTNENHWTGAVDTILAE-SDRLDALVNNAGILTLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQILDAPQSARALLG---PTLLGRAAQPMEVSQAV 225          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: KDUD_BACSU (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Bacillus subtilis GN=kduD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.927e-21
Identity = 75/226 (33.19%), Postives = 117/226 (51.77%), Query Frame = 3
Query:   27 WSLNGMTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK-LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEV 698
            +SL G TALVTG   GIG    + LA  GA I+ T   + +    +L E + + F  T    D+S   + E + ++   +F+ + ++IL+NNA I   +   D   E+   V + N  S+F L+QLA       G+G I+ I+S+   +G   V  Y A K A+  LTK+ A EWA   I+ N +AP  I T+  KP  +  + +E    I ++ P GR G+ D++
Sbjct:    8 FSLKGKTALVTGPGTGIGQGIAKALAGAGADIIGTSHTSSLSETQQLVEQEGRIF--TSFTLDMS---KPEAIKDSAAELFENRQIDILVNNAGIIHREKAEDFPEENWQHVLNVNLNSLFILTQLAGRHMLKRGHGKIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTKPIRDDEKRNE---DILKRIPAGRWGQADDI 225          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.293e-21
Identity = 70/220 (31.82%), Postives = 120/220 (54.55%), Query Frame = 3
Query:   48 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL-SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVS 701
            A+VTGG+RGIG    +  A  GA V     N+    +   +  +K G KV+ ++ D+S  +     ++   + + G +++++NNA I      + ++ E+ S+V  TN  S++++ S +  P+ KA  +G+IV ISS+ G+RG P  + Y A K  +   +K L+ E    NIR N +AP  I T M K   +  + +E+L G+    P+GR G P+E++
Sbjct:   10 AIVTGGSRGIGFGIAKLFAEHGANVQIWGINEEAGKSAAQDLSDKTGSKVSFALVDVSKNDMVSAQVQKFLAEY-GTIDVVVNNAGITRDSLLMRMSEEEWSSVIDTNLGSIYNVCSAVIRPMIKAR-SGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKGLSDNLK-NEWLKGV----PLGRVGTPEEIA 222          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_AQUAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aquifex aeolicus GN=fabG PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.607e-21
Identity = 80/231 (34.63%), Postives = 106/231 (45.89%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGILC 722
            L G  +LVTG TRGIG A  E+LA  G+ V     +     A   E  NK G K  G   +L S E   K  E + ++  G ++IL+NNA I   K  + ++  D   V   N    F ++Q +         G IV ISSV G  G      Y   K  +   TK+LA E A  N+  N VAP  I+T M     E     E       Q P+GR G P+EV+++V  LC
Sbjct:    5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG-IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSE-----EIKQKYKEQIPLGRFGSPEEVANVVLFLC 229          
The following BLAST results are available for this feature:
BLAST of CX300573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
DHK1_STRVN1.022e-2233.62Granaticin polyketide synthase putative ketoacyl r... [more]
DCXR_BOVIN1.743e-2235.56L-xylulose reductase OS=Bos taurus GN=DCXR PE=2 SV... [more]
DCXR_MESAU5.071e-2234.22L-xylulose reductase OS=Mesocricetus auratus GN=DC... [more]
PECR_RAT6.623e-2231.62Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus ... [more]
Y182_METEA1.475e-2132.17Uncharacterized oxidoreductase MexAM1_META1p0182 O... [more]
CPNA_COMTE1.475e-2132.30Cyclopentanol dehydrogenase OS=Comamonas testoster... [more]
CPNA_COMS91.475e-2132.30Cyclopentanol dehydrogenase OS=Comamonas sp. (stra... [more]
KDUD_BACSU1.927e-2133.192-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=B... [more]
FABG_CHLMU4.293e-2131.823-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG_AQUAE5.607e-2134.633-oxoacyl-[acyl-carrier-protein] reductase OS=Aqui... [more]

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Properties
Property NameValue
Genbank descriptionC07011G12SK SaltLeaf1 Citrus clementina cDNA clone C07011G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300573 ID=CX300573; Name=CX300573; organism=Citrus clementina; type=EST; length=729bp
AAGAGCTCATTCGTAGAAACAAAAGATGGTCTCTCAATGGAATGACTGCT
TTAGTCACTGGAGGAACCCGAGGCATAGGGCATGCTACTGTAGAAGAATT
AGCAAGATTTGGAGCAATTGTTCACACATGTTCACGTAATCAAATTGAGC
TCGATGCACGTTTACATGAATGGAAAAACAAAGGGTTCAAAGTAACGGGG
TCAGTATGTGACCTGTCATCCCGCGAACAGCGTGAGAAGCTAATAGAGAC
TGTCACCTCCATCTTTCAGGGGAAGCTCAACATTCTTATAAACAATGCTG
CAATAGCTTTCGTAAAACCAACGGTGGATATTACAGCTGAGGACATGTCA
ACTGTAAGCAGCACAAATTTCGAGTCTGTTTTTCATCTGTCTCAACTAGC
ACATCCTCTGTTTAAAGCATCAGGGAATGGAAGTATCGTATTTATTTCCT
CTGTTGGGGGCGTTAGAGGAATACCTTCTGTTTCTCTGTATGGTGCATAC
AAAGGAGCCATGAATCAACTAACGAAGAATTTGGCATGCGAGTGGGCAAA
GGATAACATCCGTACTAATACAGTTGCACCCTGGGTTATTAAAACCTCAA
TGATCAAACCTTTTGAGGAAGGTCCTGAAGGAAGTGAATTTCTGGATGGA
ATAGCACGTCAAACACCCATCGGTCGAGCTGGAGAGCCTGATGAGGTTTC
TTCATTGGTGGGCATTCTTTGCCTTCAGC
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