CX300573

Overview
NameCX300573
Unique NameCX300573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DCXR_HUMAN (L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.607e-21
Identity = 74/228 (32.46%), Postives = 115/228 (50.44%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL-AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 710
            L G   LVTG  +GIG  TV+ L   GA V   SR Q +LD+ + E           VC DL   E  E+ + +V     G +++L+NNAA+A ++P +++T E        N  +V  +SQ+ A  L      G+IV +SS    R + + S+Y + KGA++ LTK +A E     IR N V P V+ TSM +     P  ++ +     + P+G+  E + V + +
Sbjct:    5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG-----IEPVCVDLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTM---LNRIPLGKFAEVEHVVNAI 219          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: ACT3_STRCO (Putative ketoacyl reductase OS=Streptomyces coelicolor GN=actIII PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.607e-21
Identity = 75/235 (31.91%), Postives = 106/235 (45.11%), Query Frame = 3
Query:   48 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-----GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEE------GPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            ALVTG T GIG      L + G  V  C+R +  L   L E +  G +  G  CD+ S  + E L+  V   + G +++L+NNA       T ++  E    V  TN   VF +++    + KA      G G IV I+S GG +G+   + Y A K  +   TK L  E A+  I  N V P  ++T M     E           E  D I  + PIGR  +P EV+ +V  L
Sbjct:    9 ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK---QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYL 239          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_HAEIN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Haemophilus influenzae GN=fabG PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.563e-21
Identity = 77/229 (33.62%), Postives = 110/229 (48.03%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            + G  ALVTG TRGIG A  EEL+  GA V   + ++   +A      +KG    G V +++ +E  E L+E + + F G ++IL+NNA I      + +  E+   +  TN  SV+HLS+           G I+ I SV G  G P  + Y A K  +   +K+LA E A   I  N VAP  I T M +   +     E   GI    P GR GE  +++  V  L
Sbjct:    1 MQGKIALVTGSTRGIGRAIAEELSSKGAFVIGTATSEKGAEAISAYLGDKG---KGLVLNVTDKESIETLLEQIKNDF-GDIDILVNNAGITRDNLLMRMKDEEWFDIMQTNLTSVYHLSKAMLRSMMKKRFGRIINIGSVVGSTGNPGQTNYCAAKAGVVGFSKSLAKEVAARGITVNVVAPGFIATDMTEVLTD-----EQKAGILSNVPAGRLGEAKDIAKAVAFL 220          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: HDHA_CLOSO (NADP-dependent 7-alpha-hydroxysteroid dehydrogenase OS=Clostridium sordellii PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.249e-20
Identity = 76/231 (32.90%), Postives = 117/231 (50.65%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST---VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL--YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLV 710
            L    ALVT  TRGIG A+  +LA+ GAIV+   R          ++K +G  +     D  + +  +++I+T+    +GK++IL+NN      +  +D+   D  T   + + N  SV+ LS+L  P    +  GSIV ISSVGG   IP +S   YG  K  +N +TK +A ++AK  IR N V P +I T         P+  EF        P+ R G P+++++ V
Sbjct:    4 LENKVALVTSATRGIGLASAIKLAQNGAIVYMGVRRLEATQEICDKYKEEGLILKPVFFDAYNIDIYKEMIDTIIKN-EGKIDILVNNFGTGRPEKDLDLVNGDEDTFFELFNYNVGSVYRLSKLIIPHMIENKGGSIVNISSVGG--SIPDISRIGYGVSKSGVNNITKQIAIQYAKYGIRCNAVLPGLIATD--AAMNSMPD--EFRKSFLSHVPLNRIGNPEDIANSV 227          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: DCXR_RAT (L-xylulose reductase OS=Rattus norvegicus GN=Dcxr PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.249e-20
Identity = 76/225 (33.78%), Postives = 117/225 (52.00%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL-AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSE-FLDGIARQTPIGRAGEPDEV 698
            L G  ALVTG  +GIG +TV  L   GA V   SR + +LD+ + E           VC DL+  E  E+ +  V     G +++L+NNAA+A ++P +++T E   T  + NF +V  +SQ+ A  +      G+IV +SS    R + + ++Y + KGA++ LTK +A E     IR N V P V+ T M +     P  ++  LD I    P+G+  E + V
Sbjct:    5 LAGRRALVTGAGKGIGRSTVLALQAAGAQVVAVSRTREDLDSLVRECPG-----VEPVCVDLADWEATEQALSNV-----GPVDLLVNNAAVATLQPFLEVTKEACDTSFNVNFRAVVQVSQIVARGMIARGVPGAIVNVSSQASQRALTNHTVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTPMGRANWSDPHKAKVMLDRI----PLGKFAEVENV 215          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_VIBCH (3-oxoacyl-[acyl-carrier-protein] reductase OS=Vibrio cholerae GN=fabG PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.631e-20
Identity = 74/230 (32.17%), Postives = 109/230 (47.39%), Query Frame = 3
Query:   30 SLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            +L G  ALVTG +RGIG A  E LA  GA V   + ++    A      + G    G   ++++ E  E +++ +T  F G ++IL+NNA I      + +  E+ S +  TN  S+F LS+           G I+ + SV G  G    + Y A K  +   TK++A E A   +  NTVAP  I+T M K   +     E       Q P GR G+P E++S V  L
Sbjct:    2 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALNVTNPESIEAVLKAITDEFGG-VDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND-----EQRTATLAQVPAGRLGDPREIASAVAFL 222          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: BUTA_STAES (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=butA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.130e-20
Identity = 63/233 (27.04%), Postives = 113/233 (48.50%), Query Frame = 3
Query:   45 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN-FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM-------IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            TA++TG   G+G    E LA  G  +     N+  L     E+K KG++      D+S ++++E+L++   + F G+L++++NNA +  V P ++I  E++S + + N F ++F +   A+   K    G I+   S+ G      +  Y A K ++   T+  A E A   I  N   P V KT M       +   ++  E  +  +  + +  +GR  EP +V++LV  L
Sbjct:    4 TAIITGAAGGLGKGIAERLANDGFNIVLQDINEALLLETEKEFKEKGYQAVAYKSDVSKKKEQEELVQFAVTEF-GQLDVMVNNAGVDAVTPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDEEMVKLDDSLEIGDAFEAFSSEIKLGRYQEPSDVANLVSFL 235          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: BUTA_STAEQ (Acetoin(diacetyl) reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=butA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.130e-20
Identity = 63/233 (27.04%), Postives = 113/233 (48.50%), Query Frame = 3
Query:   45 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN-FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM-------IKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            TA++TG   G+G    E LA  G  +     N+  L     E+K KG++      D+S ++++E+L++   + F G+L++++NNA +  V P ++I  E++S + + N F ++F +   A+   K    G I+   S+ G      +  Y A K ++   T+  A E A   I  N   P V KT M       +   ++  E  +  +  + +  +GR  EP +V++LV  L
Sbjct:    4 TAIITGSAGGLGKGIAERLANDGFNIVLQDINEALLLETEKEFKEKGYQAVAFKSDVSKKKEQEELVQFAVTEF-GQLDVMVNNAGVDAVTPILEIGEEELSKLFNINVFGTLFGIQAAANQFIKQKSKGKIINACSIAGHESYEVLGTYSATKHSVRSFTQTAAKELADKGITVNAYCPGVAKTEMWDRIDEEMVKLDDSLEIGDAFEAFSSEIKLGRYQEPSDVANLVSFL 235          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: PECR_MOUSE (Peroxisomal trans-2-enoyl-CoA reductase OS=Mus musculus GN=Pecr PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20
Identity = 72/234 (30.77%), Postives = 106/234 (45.30%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-----NKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            L    A+VTGG  GIG A   EL   G  V   SR    L A + E +     +   +V+   C++   E+   L+++  + + GK+N L+NN    F+ P  DITA+    V  TN    F++ +  +  +     GSIV I  +    G P+ +  GA +  +  LTK++A  WA   +R N VAP  I  S       G  G    +      P  R G P+E+S LV  L
Sbjct:   16 LKNQVAVVTGGGTGIGKAVSRELLHLGCNVVIASRKLDRLTAAVDELRASLPPSSSAEVSAIQCNIRKEEEVSNLVKSTLAKY-GKINFLVNNGGGQFMAPVEDITAKGWHAVIETNLTGTFYMCKEVYNSWMREHGGSIVNIIVLLN-NGFPTAAHTGAAREGVYNLTKSMALAWASSGVRINCVAPGTI-YSQTAVDNYGEMGQTLFEMAFDSIPAKRLGVPEEISPLVCFL 246          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: BUTA_STAAW (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MW2) GN=butA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20
Identity = 71/235 (30.21%), Postives = 107/235 (45.53%), Query Frame = 3
Query:   36 NGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF------EEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            N   ALVTGG +GIG    E L   G  V     N+    A   +  + G K      D+S+R+     +    + F G  ++++NNA +    P   IT E   TV   N   V    Q AH  FK  +  G I+  +S  GV G P +SLY + K A+  LT+  A + A + I  N  AP +++T M++        E G   +   +    Q  +GR  +P++VS++V  L
Sbjct:    3 NNKVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAAALKLSSDGTKAIAIKADVSNRDDVFNAVRQTAAQF-GDFHVMVNNAGLGPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFL 236          
The following BLAST results are available for this feature:
BLAST of CX300573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
DCXR_HUMAN5.607e-2132.46L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 ... [more]
ACT3_STRCO5.607e-2131.91Putative ketoacyl reductase OS=Streptomyces coelic... [more]
FABG_HAEIN9.563e-2133.623-oxoacyl-[acyl-carrier-protein] reductase OS=Haem... [more]
HDHA_CLOSO1.249e-2032.90NADP-dependent 7-alpha-hydroxysteroid dehydrogenas... [more]
DCXR_RAT1.249e-2033.78L-xylulose reductase OS=Rattus norvegicus GN=Dcxr ... [more]
FABG_VIBCH1.631e-2032.173-oxoacyl-[acyl-carrier-protein] reductase OS=Vibr... [more]
BUTA_STAES2.130e-2027.04Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
BUTA_STAEQ2.130e-2027.04Acetoin(diacetyl) reductase OS=Staphylococcus epid... [more]
PECR_MOUSE2.783e-2030.77Peroxisomal trans-2-enoyl-CoA reductase OS=Mus mus... [more]
BUTA_STAAW2.783e-2030.21Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]

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Properties
Property NameValue
Genbank descriptionC07011G12SK SaltLeaf1 Citrus clementina cDNA clone C07011G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300573 ID=CX300573; Name=CX300573; organism=Citrus clementina; type=EST; length=729bp
AAGAGCTCATTCGTAGAAACAAAAGATGGTCTCTCAATGGAATGACTGCT
TTAGTCACTGGAGGAACCCGAGGCATAGGGCATGCTACTGTAGAAGAATT
AGCAAGATTTGGAGCAATTGTTCACACATGTTCACGTAATCAAATTGAGC
TCGATGCACGTTTACATGAATGGAAAAACAAAGGGTTCAAAGTAACGGGG
TCAGTATGTGACCTGTCATCCCGCGAACAGCGTGAGAAGCTAATAGAGAC
TGTCACCTCCATCTTTCAGGGGAAGCTCAACATTCTTATAAACAATGCTG
CAATAGCTTTCGTAAAACCAACGGTGGATATTACAGCTGAGGACATGTCA
ACTGTAAGCAGCACAAATTTCGAGTCTGTTTTTCATCTGTCTCAACTAGC
ACATCCTCTGTTTAAAGCATCAGGGAATGGAAGTATCGTATTTATTTCCT
CTGTTGGGGGCGTTAGAGGAATACCTTCTGTTTCTCTGTATGGTGCATAC
AAAGGAGCCATGAATCAACTAACGAAGAATTTGGCATGCGAGTGGGCAAA
GGATAACATCCGTACTAATACAGTTGCACCCTGGGTTATTAAAACCTCAA
TGATCAAACCTTTTGAGGAAGGTCCTGAAGGAAGTGAATTTCTGGATGGA
ATAGCACGTCAAACACCCATCGGTCGAGCTGGAGAGCCTGATGAGGTTTC
TTCATTGGTGGGCATTCTTTGCCTTCAGC
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