CX300573

Overview
NameCX300573
Unique NameCX300573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
SaltLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18
Identity = 70/228 (30.70%), Postives = 113/228 (49.56%), Query Frame = 3
Query:   45 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            +ALVTG +RGIG +   +LA  G   A+ +  S+ + E  A + E K KG        +++  ++ + +I+ V S F G L++L+NNA I      + +  ++   V  TN + VF+  Q A P      +G+I+ +SSV G  G P  + Y A K  +  LTK+ A E A   I  N VAP  I + M     +     E  + +  Q P+ R G+  ++++ V  L
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD-----ELKEQMLTQIPLARFGQDTDIANTVAFL 225          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18
Identity = 70/228 (30.70%), Postives = 113/228 (49.56%), Query Frame = 3
Query:   45 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            +ALVTG +RGIG +   +LA  G   A+ +  S+ + E  A + E K KG        +++  ++ + +I+ V S F G L++L+NNA I      + +  ++   V  TN + VF+  Q A P      +G+I+ +SSV G  G P  + Y A K  +  LTK+ A E A   I  N VAP  I + M     +     E  + +  Q P+ R G+  ++++ V  L
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD-----ELKEQMLTQIPLARFGQDTDIANTVAFL 225          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18
Identity = 70/228 (30.70%), Postives = 113/228 (49.56%), Query Frame = 3
Query:   45 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            +ALVTG +RGIG +   +LA  G   A+ +  S+ + E  A + E K KG        +++  ++ + +I+ V S F G L++L+NNA I      + +  ++   V  TN + VF+  Q A P      +G+I+ +SSV G  G P  + Y A K  +  LTK+ A E A   I  N VAP  I + M     +     E  + +  Q P+ R G+  ++++ V  L
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD-----ELKEQMLTQIPLARFGQDTDIANTVAFL 225          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18
Identity = 70/228 (30.70%), Postives = 113/228 (49.56%), Query Frame = 3
Query:   45 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            +ALVTG +RGIG +   +LA  G   A+ +  S+ + E  A + E K KG        +++  ++ + +I+ V S F G L++L+NNA I      + +  ++   V  TN + VF+  Q A P      +G+I+ +SSV G  G P  + Y A K  +  LTK+ A E A   I  N VAP  I + M     +     E  + +  Q P+ R G+  ++++ V  L
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD-----ELKEQMLTQIPLARFGQDTDIANTVAFL 225          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18
Identity = 70/228 (30.70%), Postives = 113/228 (49.56%), Query Frame = 3
Query:   45 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            +ALVTG +RGIG +   +LA  G   A+ +  S+ + E  A + E K KG        +++  ++ + +I+ V S F G L++L+NNA I      + +  ++   V  TN + VF+  Q A P      +G+I+ +SSV G  G P  + Y A K  +  LTK+ A E A   I  N VAP  I + M     +     E  + +  Q P+ R G+  ++++ V  L
Sbjct:    6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAE--AVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSD-----ELKEQMLTQIPLARFGQDTDIANTVAFL 225          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_RICCN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia conorii GN=fabG PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18
Identity = 71/229 (31.00%), Postives = 110/229 (48.03%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            L G T+L+TG + GIG A    L + G+ V     N+ +L +     K+     T  VC+L+ +E+   LI   +     KL+IL+ NA I      + +  ED   V   N ++ F L++ A      +  G I+ ISS+ G+ G P  + Y A K  +  +TK+L+ E A   I  NTVAP  IK+ M     E        + I ++ P+G  G P++V+  V  L
Sbjct:    4 LTGKTSLITGASGGIGGAIARLLHKLGSHVIISGSNEEKLQSLGKVVKDN---YTIEVCNLADKEECRNLISKAS-----KLDILVCNAGITSDTLAIRMKDEDFDKVIDINLKANFILNREAIKKMIQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNTVAPGFIKSDMTDKLNEKQR-----EAIVQKIPLGTYGMPEDVAHAVAFL 219          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_RICFE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia felis GN=fabG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.802e-18
Identity = 69/229 (30.13%), Postives = 111/229 (48.47%), Query Frame = 3
Query:   33 LNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            L G T+L+TG + GIG A    L + G+ V     N+ +L +  +  K+     T  +C+L+++E+   LI         KL+IL+ NA I      + +  ED   V   N ++ F L++ A      +  G I+ ISS+ G+ G P  + Y A K  +  +TK+L+ E A   I  N VAP  IK+ M     E        + I ++ P+G  G P++V++ V  L
Sbjct:    4 LTGKTSLITGASGGIGGAIARLLHKLGSHVIISGSNEEKLKSLGNVLKDN---YTIEICNLANKEECSNLISKAP-----KLDILVCNAGITSDTLAIRMKDEDFDKVIDINLKANFILNREAIKKMMQNRYGRIINISSIVGISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQR-----EAIVQKIPLGTYGMPEDVANAVAFL 219          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: LVR_LEIAQ (Levodione reductase OS=Leifsonia aquatica GN=lvr PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.577e-18
Identity = 75/234 (32.05%), Postives = 109/234 (46.58%), Query Frame = 3
Query:   51 LVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK-------PFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            L+TGG  G+G AT   LA  GA   +V   S       A + E      +V  +V D+S   Q E  +   T  F G+++   NNA I   + PT   TA +   V S N   VF   +    + +  G+G +V  +SVGG+RGI + S Y A K  +  LT+N A E+ +  IR N +AP  I T M++       P        EF+    +  P  R GE  E++++V  L
Sbjct:   17 LITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA-EVLTTVADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFI----QVNPSKRYGEAPEIAAVVAFL 244          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.577e-18
Identity = 67/228 (29.39%), Postives = 114/228 (50.00%), Query Frame = 3
Query:   45 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            +ALVTG +RGIG +   +LA  G   A+ +  S+++ E  A + E K KG +      +++  ++ +++I+ V S F G +++L+NNA I      + +  ++   V  TN + VF+  Q   P      +G+I+ ++S+ G  G P  + Y A K  +  LTK  A E A   I  N VAP  I + M     +     +  D +  Q P+ R GE  ++++ V  L
Sbjct:    4 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAE--AVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQF-GSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSD-----DLKDQMLEQIPLKRFGEDTDIANTVAFL 223          
BLAST of CX300573 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.577e-18
Identity = 67/228 (29.39%), Postives = 114/228 (50.00%), Query Frame = 3
Query:   45 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPEGSEFLDGIARQTPIGRAGEPDEVSSLVGIL 719
            +ALVTG +RGIG +   +LA  G   A+ +  S+++ E  A + E K KG +      +++  ++ +++I+ V S F G +++L+NNA I      + +  ++   V  TN + VF+  Q   P      +G+I+ ++S+ G  G P  + Y A K  +  LTK  A E A   I  N VAP  I + M     +     +  D +  Q P+ R GE  ++++ V  L
Sbjct:    4 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAE--AVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQF-GSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSD-----DLKDQMLEQIPLKRFGEDTDIANTVAFL 223          
The following BLAST results are available for this feature:
BLAST of CX300573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 263
Match NameE-valueIdentityDescription
FABG_STAAS4.442e-1830.703-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAR4.442e-1830.703-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAN4.442e-1830.703-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAM4.442e-1830.703-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAAC4.442e-1830.703-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_RICCN4.442e-1831.003-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
FABG_RICFE5.802e-1830.133-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
LVR_LEIAQ7.577e-1832.05Levodione reductase OS=Leifsonia aquatica GN=lvr P... [more]
FABG_STAES7.577e-1829.393-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ7.577e-1829.393-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionC07011G12SK SaltLeaf1 Citrus clementina cDNA clone C07011G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300573 ID=CX300573; Name=CX300573; organism=Citrus clementina; type=EST; length=729bp
AAGAGCTCATTCGTAGAAACAAAAGATGGTCTCTCAATGGAATGACTGCT
TTAGTCACTGGAGGAACCCGAGGCATAGGGCATGCTACTGTAGAAGAATT
AGCAAGATTTGGAGCAATTGTTCACACATGTTCACGTAATCAAATTGAGC
TCGATGCACGTTTACATGAATGGAAAAACAAAGGGTTCAAAGTAACGGGG
TCAGTATGTGACCTGTCATCCCGCGAACAGCGTGAGAAGCTAATAGAGAC
TGTCACCTCCATCTTTCAGGGGAAGCTCAACATTCTTATAAACAATGCTG
CAATAGCTTTCGTAAAACCAACGGTGGATATTACAGCTGAGGACATGTCA
ACTGTAAGCAGCACAAATTTCGAGTCTGTTTTTCATCTGTCTCAACTAGC
ACATCCTCTGTTTAAAGCATCAGGGAATGGAAGTATCGTATTTATTTCCT
CTGTTGGGGGCGTTAGAGGAATACCTTCTGTTTCTCTGTATGGTGCATAC
AAAGGAGCCATGAATCAACTAACGAAGAATTTGGCATGCGAGTGGGCAAA
GGATAACATCCGTACTAATACAGTTGCACCCTGGGTTATTAAAACCTCAA
TGATCAAACCTTTTGAGGAAGGTCCTGAAGGAAGTGAATTTCTGGATGGA
ATAGCACGTCAAACACCCATCGGTCGAGCTGGAGAGCCTGATGAGGTTTC
TTCATTGGTGGGCATTCTTTGCCTTCAGC
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