CX305174

Overview
NameCX305174
Unique NameCX305174
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length520
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX305174 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.263e-26
Identity = 60/83 (72.29%), Postives = 69/83 (83.13%), Query Frame = -2 
Query:  271 VKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 519
            VKVEVEE R+LQISGER+ E+E+KND WHRVERSSGKF+RRFRLP+NAK++QVKASMENGVLTVT           K+IEISG
Sbjct:   72 VKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEISG 154
[Close]
BLAST of CX305174 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.263e-26
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = -2 
Query:  271 VKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 519
            VKVEVE+ R+LQISGERS E+E+KND+WHRVERSSGKFLRRFRLP+NAK+++VKASMENGVLTVT           K+IEISG
Sbjct:   76 VKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158
[Close]
BLAST of CX305174 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.955e-26
Identity = 59/83 (71.08%), Postives = 69/83 (83.13%), Query Frame = -2 
Query:  271 VKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 519
            VKV++E+ ++LQISGER+ E+E+KND WHRVERSSGKF+RRFRLP+NAKVEQVKASMENGVLTVT           KAIEISG
Sbjct:   79 VKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161
[Close]
BLAST of CX305174 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.955e-26
Identity = 60/83 (72.29%), Postives = 69/83 (83.13%), Query Frame = -2 
Query:  271 VKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 519
            VKVEVEE R+LQISGER+ E+E+KNDKW RVERSSGKF+RRFRLP+NAK++QVKASMENGVLTVT           K+IEISG
Sbjct:   72 VKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKPDVKSIEISG 154
[Close]
BLAST of CX305174 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 5.041e-26
Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = -2 
Query:  271 VKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 519
            VKVEVE+G ILQISGERS E EEK+D WHRVERSSGKF+RRFRLP+NAKVE+VKASMENGVL+VT           K+++ISG
Sbjct:   74 VKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156
[Close]
BLAST of CX305174 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.041e-26
Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = -2 
Query:  271 VKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 519
            VKV++E+ R+LQISGER+ E+E+KND WHRVERSSG F+RRFRLP+NAKVEQVKASMENGVLTVT           KAIEISG
Sbjct:   71 VKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153
[Close]
BLAST of CX305174 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.041e-26
Identity = 58/83 (69.88%), Postives = 69/83 (83.13%), Query Frame = -2 
Query:  271 VKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 519
            VKVEVE+G +L +SGERS+E+E+KNDKWHRVERSSGKF+RRFRLP++AKVE+VKA +ENGVLTVT           KAIEISG
Sbjct:   69 VKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIEISG 151
[Close]
BLAST of CX305174 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.598e-26
Identity = 59/83 (71.08%), Postives = 68/83 (81.93%), Query Frame = -2 
Query:  271 VKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 519
            VKVEVEEG++LQISGER+KE+EEKN+KWHRVE SSGKFLRRFRLP+NA V++VKA MENGVLTVT           K+I ISG
Sbjct:   77 VKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHISG 159
[Close]
BLAST of CX305174 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.598e-26
Identity = 58/83 (69.88%), Postives = 68/83 (81.93%), Query Frame = -2 
Query:  271 VKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 519
            VKVEVE+  +LQISGERSKE EEKNDKWHRVER+SGKF+RRFRLP+NAK+E+VKA+MENGVLTV            K+I+ISG
Sbjct:   77 VKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159
[Close]
BLAST of CX305174 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.467e-25
Identity = 57/83 (68.67%), Postives = 69/83 (83.13%), Query Frame = -2 
Query:  271 VKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 519
            VK+E+++GR+LQISGER+ E+E+KND WHRVERSSGK +RRFRLP+NAKV+QVKASMENGVLTVT           KAI+ISG
Sbjct:   71 VKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153
The following BLAST results are available for this feature:
BLAST of CX305174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
HSP12_SOLPE2.263e-2672.2917.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_PEA2.263e-2672.2918.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP16_SOYBN2.955e-2671.0818.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOLPE2.955e-2672.2917.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP17_ARATH5.041e-2671.0817.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP13_SOYBN5.041e-2671.0817.5 kDa class I heat shock protein OS=Glycine max... [more]
HS16A_WHEAT5.041e-2669.8816.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HSP12_DAUCA8.598e-2671.0818.0 kDa class I heat shock protein OS=Daucus caro... [more]
HS181_ARATH8.598e-2669.8818.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP11_SOYBN1.467e-2568.6717.3 kDa class I heat shock protein OS=Glycine max... [more]

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Properties
Property NameValue
Genbank descriptionC18002B02Rv Drought1 Citrus clementina cDNA clone C18002B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX305174 ID=CX305174; Name=CX305174; organism=Citrus clementina; type=EST; length=520bp
TTTNTTTTTTTTTTTTTTTTTTTTTATTCGCATTACAAAATATATTTTAT
TGCATCACACTTTTTTATCATTTAAAAAACTAGTTACAACGCTTGAGACT
GGCTCCTGAAGCTCTTGCAAACACACAAACATAATCACATCAAATTAAAC
AGGGGGAAGGGAAGAAAACAAACACACACACACATACAAACACACAAGGG
CTTTGCTTTCGTACCAAATTTATTAGCAAACCAAAGACACAATCTTGAAA
ACATTTACAGTTATCACTTAGCCAGAGATCTCAATAGCCTTAACTTCAGG
TTTCTTCTCCTCCTGTTTAGGAACGGTGACTGTGAGCACACCATTCTCCA
TGCTGGCCTTAACCTGTTCCACCTTAGCATTGTCGGGCAACCTGAACCTC
CTCAGGAACTTGCCACTGCTCCTCTCGACGCGATGCCACTTGTCATTCTT
CTCTTCCTGCTCCTTGCTCCTCTCTCCGCTTATCTGCAGAATCCTGCCCT
CTTCAACCTCAACTTTTACT
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