CX305194
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: EIF1_HUMAN (Eukaryotic translation initiation factor 1 OS=Homo sapiens GN=EIF1 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25 Identity = 52/104 (50.00%), Postives = 73/104 (70.19%), Query Frame = -3 Query: 212 YDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD D L G + Y+H+R+QQRNG+K LTTVQG+ +D+ +K++K KK+F CNG V+ G+VIQLQGD RKN+ FLV+ + D++K+HGF Sbjct: 10 FDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: EIF1_BOVIN (Eukaryotic translation initiation factor 1 OS=Bos taurus GN=EIF1 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25 Identity = 52/104 (50.00%), Postives = 73/104 (70.19%), Query Frame = -3 Query: 212 YDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD D L G + Y+H+R+QQRNG+K LTTVQG+ +D+ +K++K KK+F CNG V+ G+VIQLQGD RKN+ FLV+ + D++K+HGF Sbjct: 10 FDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: EIF1B_PIG (Eukaryotic translation initiation factor 1b OS=Sus scrofa GN=EIF1B PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25 Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = -3 Query: 212 YDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD D L G + Y+H+R+QQRNG+K LTTVQG+ +D+ +K++K KK+F CNG V+ G+VIQLQGD RKN+ FL++ IV ++++K+HGF Sbjct: 10 FDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: EIF1B_MOUSE (Eukaryotic translation initiation factor 1b OS=Mus musculus GN=Eif1b PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25 Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = -3 Query: 212 YDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD D L G + Y+H+R+QQRNG+K LTTVQG+ +D+ +K++K KK+F CNG V+ G+VIQLQGD RKN+ FL++ IV ++++K+HGF Sbjct: 10 FDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: EIF1B_MACFA (Eukaryotic translation initiation factor 1b OS=Macaca fascicularis GN=EIF1B PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25 Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = -3 Query: 212 YDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD D L G + Y+H+R+QQRNG+K LTTVQG+ +D+ +K++K KK+F CNG V+ G+VIQLQGD RKN+ FL++ IV ++++K+HGF Sbjct: 10 FDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: EIF1B_HUMAN (Eukaryotic translation initiation factor 1b OS=Homo sapiens GN=EIF1B PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 5.399e-25 Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = -3 Query: 212 YDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD D L G + Y+H+R+QQRNG+K LTTVQG+ +D+ +K++K KK+F CNG V+ G+VIQLQGD RKN+ FL++ IV ++++K+HGF Sbjct: 10 FDPFADATKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLLEVGIVKEEQLKVHGF 113
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: EIF1_MOUSE (Eukaryotic translation initiation factor 1 OS=Mus musculus GN=Eif1 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 7.051e-25 Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = -3 Query: 212 YDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD D L G + Y+H+R+QQRNG+K LTTVQG+ +D+ +K++K KK+F CNG V+ G+VIQLQGD RKN+ FL++ + D++K+HGF Sbjct: 10 FDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF 113
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: SUI1_ASHGO (Protein translation factor SUI1 OS=Ashbya gossypii GN=SUI1A PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 9.209e-25 Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = -3 Query: 212 YDPFADIKDSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD D A Y+H+R+QQRNG+K LTTVQG+ E++ ++ILK L+K+F CNGN+V D +G++IQLQGD R V FL+ + K IKIHGF Sbjct: 9 FDPFADTGDDEA-SSSNYIHIRIQQRNGRKTLTTVQGIPEEYDLKRILKVLRKDFGCNGNMVKDDEMGEIIQLQGDQRAKVCEFLITQLAIPKKNIKIHGF 108
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: SUI1_YEAST (Eukaryotic translation initiation factor eIF-1 OS=Saccharomyces cerevisiae GN=SUI1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.571e-24 Identity = 52/101 (51.49%), Postives = 70/101 (69.31%), Query Frame = -3 Query: 212 YDPFADIKDSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 514 +DPFAD D Y+H+R+QQRNG+K LTTVQG+ E++ ++ILK LKK+F CNGN+V D +G++IQLQGD R V F++ + K IKIHGF Sbjct: 9 FDPFADTGDD-ETATSNYIHIRIQQRNGRKTLTTVQGVPEEYDLKRILKVLKKDFACNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQLGLQKKNIKIHGF 108
BLAST of CX305194 vs. ExPASy Swiss-Prot
Match: SUI1_SCHPO (Protein translation factor sui1 OS=Schizosaccharomyces pombe GN=sui1 PE=2 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 6.600e-23 Identity = 55/100 (55.00%), Postives = 68/100 (68.00%), Query Frame = -3 Query: 212 DPFADIKDSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 511 DPFAD D A +H+R+QQRNG+K LTTVQGL +F ++IL+ LKK+F CNG +V D LG+VIQLQGD R VM FL + + K IKIHGF Sbjct: 11 DPFADTGDDDAQ-PLNNIHIRIQQRNGRKTLTTVQGLPREFDQKRILRALKKDFACNGTIVKDDDLGEVIQLQGDQRIKVMEFLTQQLGLQKKNIKIHGF 109 The following BLAST results are available for this feature:
BLAST of CX305194 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305194 ID=CX305194; Name=CX305194; organism=Citrus clementina; type=EST; length=516bpback to top |