CX306013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 9.044e-41 Identity = 77/113 (68.14%), Postives = 90/113 (79.65%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSL+PS FGGRRTNVFDP SLDVWDPF+GFL+ LTNAP A++ + F NA++DW+ETP+AHVFKAD+PGL+ G ILQISGERS E EEK+D WHRVERSSGKF Sbjct: 1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAP--AKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKF 111
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 2.015e-40 Identity = 81/115 (70.43%), Postives = 92/115 (80.00%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFL--SSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIPSIFGGRR+NVFDP S D+WDPF+GF SSAL NA S+AR+ + F NAR+DWKETP+AHVFKADLPGL+ +LQISGERSKE EEKNDKWHRVER+SGKF Sbjct: 1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKF 114
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 2.015e-40 Identity = 82/114 (71.93%), Postives = 91/114 (79.82%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLS-SALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIPSIFGGRRTNVFDP SLDV+DPF+GFL+ S L NAP A + + F NA++DW+ETP+AHVFKADLPGLR G ILQISGERS E EEKNDKWHRVERSSGKF Sbjct: 1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKF 112
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 3.217e-38 Identity = 75/113 (66.37%), Postives = 86/113 (76.11%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MS+IPS FGGRR+NVFDP SLDVWDPF F ++A +ET+ F N IDWKETPQAHVFKADLPGL+ G++LQISGER+KE+EEKNDKWHRVERSSGKF Sbjct: 1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDF-PLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKF 112
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.932e-36 Identity = 71/113 (62.83%), Postives = 84/113 (74.34%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIPS FGGRR+NVFDP SLDVWDPF F + + S RE S F + R+DWKETP+AHVFKADLPG++ R+LQISGERS E+E+KND+WHR+ERSSGKF Sbjct: 1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKF 113
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.549e-35 Identity = 73/118 (61.86%), Postives = 86/118 (72.88%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGF-----LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIP+ FGGRR NVFDP SLDVWDPF F LSSA + P +RE S F + R+DWKETP+AHVFKAD+PGL+ ++LQISGER+ E+E+KND WHRVERSSGKF Sbjct: 1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSA--SFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKF 116
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.549e-35 Identity = 71/113 (62.83%), Postives = 82/113 (72.57%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIPS F GRR+NVFDP SLDVWDP F S + + S RE F + R+DWKETP+AHVFKADLPGL+ R+LQISGERS E+E+KND+WHRVERSSGKF Sbjct: 1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKF 113
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 5.678e-35 Identity = 69/113 (61.06%), Postives = 82/113 (72.57%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MS+IPS F +R+N+FDP SLD WDPF G +S+ ARET+ NARIDWKETP+AHV KADLPG++ GR+LQISGER +EQEEK+D WHRVERSSGKF Sbjct: 1 MSIIPSFFTSKRSNIFDPFSLDTWDPFQGIIST------EPARETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKF 107
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 9.686e-35 Identity = 69/114 (60.53%), Postives = 85/114 (74.56%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGF-LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MS+IPS FG RR+NV +P SLD+WDPF + L ++ + +ET+ FAN IDWKETPQAHVFKADLPGL+ G++LQISGER+KE+EEKN+KWHRVE SSGKF Sbjct: 1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKF 114
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.158e-34 Identity = 71/114 (62.28%), Postives = 84/114 (73.68%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTNAPSS-ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIPSIFGGRR+NVFDP SLDVWDPF F + P+S + E S F N R+DWKETP+AHVF+AD+PGL+ R+LQISGER+ E+E+KND WHRVERSSG F Sbjct: 1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDF------HFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNF 108 The following BLAST results are available for this feature:
BLAST of CX306013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306013 ID=CX306013; Name=CX306013; organism=Citrus clementina; type=EST; length=416bpback to top |