CX306013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 6.278e-34 Identity = 71/113 (62.83%), Postives = 83/113 (73.45%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTNAPSS-ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGK 412 MSLIPS FGGRR++VFDP SLDVWDPF F PSS + E S F + R+DWKETP+AHVFKAD+PGL+ GR+LQISGER+ E+E+KND WHRVERSSGK Sbjct: 1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDF------PFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGK 107
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.071e-33 Identity = 69/115 (60.00%), Postives = 83/115 (72.17%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIP FGGRR+NVFDP SLD+WDPF F + P+S+ E S F + R+DWKETP+AHVFKAD+PGL+ R+LQISGER+ E+E+KND WHRVERSSGKF Sbjct: 1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDF------HVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKF 109
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.315e-33 Identity = 69/112 (61.61%), Postives = 80/112 (71.43%), Query Frame = 2 Query: 107 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSS---------ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 RR+NVFDP SLD+WDPFDGF + + + S + ET+ FA ARIDWKETP+AHVFKAD+PGL+ G +LQISGERSKEQEEK DKWHRVERSSGKF Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKF 116
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.184e-32 Identity = 72/112 (64.29%), Postives = 82/112 (73.21%), Query Frame = 2 Query: 107 RRTNVFDPVSLDVWDPFDGFL-----SSALTNAPSSAR----ETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 RR+NVFDP SLD+WDPFDGF SS+ + PS R ET+ FA ARIDWKETP+AHVFKAD+PGL+ G ILQISGER+KEQEEK D+WHRVERSSGKF Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKF 116
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.546e-32 Identity = 72/118 (61.02%), Postives = 89/118 (75.42%), Query Frame = 2 Query: 77 MSLIPSIF--GGRRTNVFDPVSLD-VWDPFDGFLSSALTNAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIP+ + GRR+N+FDP SLD +WDPF G L S L+ P S A ET+ FANARIDWKETP+AHVFKADLPG++ G +L+ISG+R++E+EEKND WHRVERSSG+F Sbjct: 1 MSLIPNNWFNTGRRSNIFDPFSLDEIWDPFFG-LPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQF 117
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP15_SOYBN (17.6 kDa class I heat shock protein OS=Glycine max GN=HSP17.6-L PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.020e-32 Identity = 68/115 (59.13%), Postives = 82/115 (71.30%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTNVFDPVSLDVWDPFDGFLSSALTNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIPSIFGG R+NVFDP SLD+WDPF F + P+S+ E S F N R+DWKET +AHV KAD+PGL+ R+LQISGER+ E+E+KND WHRV+RSSGKF Sbjct: 1 MSLIPSIFGGPRSNVFDPFSLDMWDPFKDF------HVPTSSVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVDRSSGKF 109
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.638e-32 Identity = 72/114 (63.16%), Postives = 83/114 (72.81%), Query Frame = 2 Query: 77 MSLIPSIFGGRR-TNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIP IFG RR T+VFDP S+DV+DPF L S++ ETS FAN RIDWKETP+AHVFKADLPGL+ R+LQISGER+ E+E+KND WHRVERSSGKF Sbjct: 1 MSLIPRIFGDRRSTSVFDPFSIDVFDPF-----KELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKF 109
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 2.638e-32 Identity = 66/105 (62.86%), Postives = 78/105 (74.29%), Query Frame = 2 Query: 107 RRTNVFDPVSLDVWDPFDGFLSSALTNA--PSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 RR+NVFDP SLD+WDPFDGF + + + P + + + FA ARIDWKETP+AHVFKAD+PGL+ G +LQISGER KEQEEK DKWHRVERSSGKF Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKF 109
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS16B_ORYSJ (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP16.9B PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.710e-31 Identity = 63/103 (61.17%), Postives = 78/103 (75.73%), Query Frame = 2 Query: 107 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 RR+NVFDP SLD+WDPFD S + +S +T+ FANARIDWKETP++HVFKADLPG++ G +L ISG+RSKE+E+KNDKWHRVERSSG+F Sbjct: 5 RRSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQF 105
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS16A_ORYSJ (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica GN=HSP16.9A PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.710e-31 Identity = 63/103 (61.17%), Postives = 78/103 (75.73%), Query Frame = 2 Query: 107 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 RR+NVFDP SLD+WDPFD S + +S +T+ FANARIDWKETP++HVFKADLPG++ G +L ISG+RSKE+E+KNDKWHRVERSSG+F Sbjct: 5 RRSNVFDPFSLDLWDPFDSVFRSVVP--ATSDNDTAAFANARIDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQF 105 The following BLAST results are available for this feature:
BLAST of CX306013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306013 ID=CX306013; Name=CX306013; organism=Citrus clementina; type=EST; length=416bpback to top |