CX306013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.974e-31 Identity = 66/114 (57.89%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 77 MSLIPSIFGG-RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MS+IPS F RR+N+FDP SLDVWDPF SS+L+ RE S NAR+DW+ETP+AHVFKADLPGL+ +L+ISGER E+E+KND WHRVERSSG+F Sbjct: 1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLS------RENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQF 108
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.485e-31 Identity = 69/114 (60.53%), Postives = 83/114 (72.81%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTN-VFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIP IFG RR++ +FDP S+DV+DPF L +++ ETS FAN RIDWKETP+AHVFKADLPGL+ R+LQISGER+ E+E+KNDKW RVERSSGKF Sbjct: 1 MSLIPRIFGDRRSSSMFDPFSIDVFDPF-----RELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKF 109
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.485e-31 Identity = 66/110 (60.00%), Postives = 77/110 (70.00%), Query Frame = 2 Query: 107 RRTNVFDPVSLDVWDPFDGF-------LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 RR N FDP SLD+WDP DGF SS+ + P + + + FA ARIDWKETP+ HVFKAD+PGL+ G ILQISGERS+EQEEK+DKWHRVERSSGKF Sbjct: 5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKF 114
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.211e-30 Identity = 62/103 (60.19%), Postives = 78/103 (75.73%), Query Frame = 2 Query: 107 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 RR+NVFDP + D WDPFDG S + +S R+T+ FANAR+DWKETP++HVFKADLPG++ G +L ISG+RSKE+E+KNDKWHRVERSSG+F Sbjct: 5 RRSNVFDPFA-DFWDPFDGVFRSLVP--ATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQF 104
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.500e-30 Identity = 68/116 (58.62%), Postives = 84/116 (72.41%), Query Frame = 2 Query: 77 MSLIPSIFGGRRTN-VFDPVSLDVWDPFD--GFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIP IFG RR++ +FDP S+DV+DPF GF S+ ++ E+S FAN RIDWKETP+ HVFK DLPGL+ R+LQISGER+ E+E+KNDKWHR+ERSSGKF Sbjct: 1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPST-------NSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKF 109
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 7.942e-29 Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = 2 Query: 107 RRTNVFDPVSLDVW-DPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 RRTNVFDP + D+W DPFD F S + ET+ FANAR+DWKETP+AHVFKADLPG++ G +L +SGER+KE+E+KNDKWHRVERSSGKF Sbjct: 5 RRTNVFDPFA-DLWADPFDTF-RSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKF 106
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.018e-28 Identity = 62/104 (59.62%), Postives = 77/104 (74.04%), Query Frame = 2 Query: 107 RRTNVFDPVSLDVW-DPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 RR+NVFDP + D+W DPFD F S + S+ ET+ FANAR+DWKETP+AHVFK DLPG++ G +L +SGERS+E+E+KNDKWHRVERSSGKF Sbjct: 5 RRSNVFDPFA-DLWADPFDTFRSIVPAISGGSS-ETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKF 106
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.941e-28 Identity = 64/115 (55.65%), Postives = 75/115 (65.22%), Query Frame = 2 Query: 77 MSLIPSIFGGRR--TNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIPS FG R ++FDP SLDVWDPF L S + ETS NAR+DWKET +AHVFKADLPG++ +L+ISGER E+EEK D WHRVERSSG+F Sbjct: 1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPF-----KELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQF 110
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.148e-28 Identity = 59/98 (60.20%), Postives = 72/98 (73.47%), Query Frame = 2 Query: 125 DPVSLDVWDPFDGF-LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 DP SLDVWDPF F +++ +A S +E S F + RIDWKETP+AHVFKADLPGL+ R+LQISGER+ E+E+KND+WHRVERSSGKF Sbjct: 1 DPFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKF 98
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.498e-27 Identity = 65/116 (56.03%), Postives = 75/116 (64.66%), Query Frame = 2 Query: 77 MSLIPSIFGGRR---TNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 MSLIPS FG R N+FDP SLDVWDPF PSS+ +S ANAR+DWKET +AHVFKADLPG++ +L+ISGER E+EEK D WHRVERSSG F Sbjct: 1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKEL------QFPSSS--SSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGF 108 The following BLAST results are available for this feature:
BLAST of CX306013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX306013 ID=CX306013; Name=CX306013; organism=Citrus clementina; type=EST; length=416bpback to top |