CX306013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.168e-18 Identity = 48/106 (45.28%), Postives = 62/106 (58.49%), Query Frame = 2 Query: 107 RRTNVFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQE---EKNDKWHRVERSSGKF 415 R NV DP+S+D W D F + S A N R+DWKETP AHVF ADLPG+R G +L ISGER++E++ + +++WH VERSSGKF Sbjct: 5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKF 105
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.307e-18 Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 2 Query: 101 GGRRTNVFDPVSLDVWDPF-DGFLSSALTNAPSSARETSQF-ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 GG +PVS+D+ +PF D +A APS+A + + A +DWKET AHVF AD+PG+R ++L+ISG+R++ EEK ++WHRVERSS +F Sbjct: 26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERF 132
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.315e-15 Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 227 ARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 AR+DWKETP+ HV D+PGL+ R+L++SGER KE+E+K D WHRVERS GKF Sbjct: 67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKF 129
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.315e-15 Identity = 34/65 (52.31%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 221 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 ++AR+DWKETP+ HV D+PGL+ R+L++SGER KE+++K D WHRVERS GKF Sbjct: 73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKF 137
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.100e-13 Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 203 RETS-QFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 R+TS + AR+DWKET + H D+PGL+ +L++SGER +E+E+K D+WHRVERS GKF Sbjct: 62 RDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKF 133
BLAST of CX306013 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.581e-13 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 2 Query: 119 VFDPVSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLP-GLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKF 415 +FD ++ D W+PF F ++ +A A +TS FAN I+ +ET +A+VF+ADLP G++ G +L I+GERS +EEK + H +ERS F Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATF 104 The following BLAST results are available for this feature:
BLAST of CX306013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX306013 ID=CX306013; Name=CX306013; organism=Citrus clementina; type=EST; length=416bpback to top |