CX306031

Overview
NameCX306031
Unique NameCX306031
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length432
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX306031 vs. ExPASy Swiss-Prot
Match: HEVL_ARATH (Hevein-like protein OS=Arabidopsis thaliana GN=HEL PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.600e-30
Identity = 57/90 (63.33%), Postives = 69/90 (76.67%), Query Frame = -1 
Query:  163 ATWDANKPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLSQGVFKKLDTNGIGYHQGFLTVSYEFVN 432
            +TWDA+KP AWR KYGWTAFC   GP GQA+CG+CLRV N+ T A   VRIVDQC+NGGLDL   +F ++DT+G GY QG L V Y+FV+
Sbjct:  101 STWDADKPYAWRSKYGWTAFCGPAGPRGQASCGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGHLIVDYQFVD 190
[Close]
BLAST of CX306031 vs. ExPASy Swiss-Prot
Match: WIN_SOYBN (Wound-induced protein (Fragment) OS=Glycine max GN=WIN PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.769e-29
Identity = 56/84 (66.67%), Postives = 68/84 (80.95%), Query Frame = -1 
Query:  163 KPLAWRQKYGWTAFCHSGGPIGQAACGRCLRVTNSGTGAQQIVRIVDQCANGGLDLSQGVFKKLDTNGIGYHQGFLTVSYEFVN 414
            KP +WR KYGWTAFC   GP G+ +CG+CLRVTN+GTGA  IVRIVDQC+NGGLDL  GVF ++DT+G GY QG L V+Y+FV+
Sbjct:    1 KPYSWRSKYGWTAFCGPVGPRGRDSCGKCLRVTNTGTGANTIVRIVDQCSNGGLDLDVGVFNRIDTDGRGYQQGHLIVNYQFVD 84
The following BLAST results are available for this feature:
BLAST of CX306031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
HEVL_ARATH1.600e-3063.33Hevein-like protein OS=Arabidopsis thaliana GN=HEL... [more]
WIN_SOYBN1.769e-2966.67Wound-induced protein (Fragment) OS=Glycine max GN... [more]

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Properties
Property NameValue
Genbank descriptionC18013B08Rv Drought1 Citrus clementina cDNA clone C18013B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306031 ID=CX306031; Name=CX306031; organism=Citrus clementina; type=EST; length=432bp
CGAACTTCATTGATTACACAGACGTGGATGATACTTTATCAGAAGTTTAA
ATTTTATGTATTGACTAATTATATAGAGGGATAATTAATTAATAAATTAA
CCCTATTACAGCGTTAAGCTTCCATCGATCATGGAATTATAGATGGAGCT
TTAATCATTGGAGTTTACAAACTCGTAGCTGACAGTGAGGAAGCCTTGAT
GATAGCCTATTCCATTGGTGTCCAATTTCTTGAACACTCCTTGCGACAAA
TCTAAGCCTCCATTGGCACACTGATCAACAATTCTCACAATTTGTTGGGC
TCCTGTACCACTGTTTGTGACCCTTAAGCACCTGCCACAAGCAGCTTGTC
CAATGGGTCCGCCCGAATGACAGAAAGCAGTCCAGCCATATTTCTGGCGC
CAGGCCAAGGGCTTGTTGGCATCCCATGTTGC
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