CX306049
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306049 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.108e-28 Identity = 59/101 (58.42%), Postives = 77/101 (76.24%), Query Frame = -3 Query: 218 YCKKH-VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 517 YC KH V+A + ++DDLK WD +F++ D +T+FDLI AANYLNIK L DL CQTVA++IKG TPE+IR+ FNI+ND +P+EE +RREN+WAFE Sbjct: 59 YCNKHHVDAAN------PCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153
BLAST of CX306049 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 3.436e-27 Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = -3 Query: 218 YCKKH-VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 517 YC KH V+A + +++DLK WD +F++ Q+T+FDLI+AANYLNIK LLDL CQTVADMIK T E RK FNI+ND++ +EEE VRRENQW FE Sbjct: 58 YCNKHHVDAAN------PCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152
BLAST of CX306049 vs. ExPASy Swiss-Prot
Match: SKP1_YEAST (Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae GN=SKP1 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 6.480e-26 Identity = 53/99 (53.54%), Postives = 76/99 (76.77%), Query Frame = -3 Query: 224 YCKKHVEAGSGDKKDDKSTED-DLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 517 + + H ++ D+ DD S + + +WD +F+KVDQ L+++ILAANYLNIK LLD C+ VA+MI+G++PEEIR+TFNI NDF+P+EE +RREN+WA Sbjct: 93 WAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191
BLAST of CX306049 vs. ExPASy Swiss-Prot
Match: ASK16_ARATH (SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.444e-25 Identity = 55/110 (50.00%), Postives = 77/110 (70.00%), Query Frame = -3 Query: 218 YCKKHVEAGSGDKKD---------DKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 517 YCKKHV D D ++ +++L+TWDA+F+K D T+ LILA NYLN++ LL LTCQTVAD +K +PEE+R+ FNI+ND++P+EE+ +R+EN WAFE Sbjct: 58 YCKKHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFE 167
BLAST of CX306049 vs. ExPASy Swiss-Prot
Match: ASK18_ARATH (SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.885e-25 Identity = 55/100 (55.00%), Postives = 74/100 (74.00%), Query Frame = -3 Query: 221 YCKKHVEAGSGDKKDDKSTEDDLKTWDADFV-KVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAF 517 Y K HV S ++ +D+ + +L +WDA F+ K+D T+F +ILAANYLN +GLL QTVAD IK KTPEE+R+ FNI+NDF+P+EEEE+R+EN W F Sbjct: 58 YAKMHVNEPS-EEDEDEEAKKNLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTF 156
BLAST of CX306049 vs. ExPASy Swiss-Prot
Match: SKP1_SCHPO (Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe GN=skp1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.462e-25 Identity = 55/104 (52.88%), Postives = 80/104 (76.92%), Query Frame = -3 Query: 224 YCKKH---VEAGSGDKKD---DKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 517 +C+ H + +G+ ++ D KST D+ WD F+ VDQ LF+++LA+NYL+IK LLD C+TVA+MI+GK+PE+IRKTFNI NDF+P+EEE++R+EN+WA Sbjct: 57 WCEHHKNDLYSGTEEESDIRLKKST--DIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
BLAST of CX306049 vs. ExPASy Swiss-Prot
Match: ASK5_ARATH (SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.222e-24 Identity = 56/106 (52.83%), Postives = 76/106 (71.70%), Query Frame = -3 Query: 218 YCKKHVEAGSGDKKDDKSTEDDLKTWDADFVKVDQNT-LFDLILAANYLNIKGLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 517 YC+KHV++ E+DLK WDADF+K + T LFD+++AANYLNI+ LLDLTC+TV AD++ GKTP+EIR FNI+ND + +E ++R ENQWAF+ Sbjct: 57 YCEKHVKS---------KEEEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153
BLAST of CX306049 vs. ExPASy Swiss-Prot
Match: ASK19_ARATH (SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.644e-24 Identity = 64/133 (48.12%), Postives = 79/133 (59.40%), Query Frame = -3 Query: 218 YCKKHVE-----------AGSGDKK--------DD----KSTEDD---------LKTWDADFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 517 YCKKHVE + GDK DD +STE D L WDA F+K D T+FD+ILAANYLN++GL DL +T+AD IK TPEE+R+ FNI+NDF+P+EEE +R EN W FE Sbjct: 58 YCKKHVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAWTFE 190
BLAST of CX306049 vs. ExPASy Swiss-Prot
Match: ASK8_ARATH (SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23 Identity = 53/101 (52.48%), Postives = 74/101 (73.27%), Query Frame = -3 Query: 218 YCKKH-VEAGSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 517 YC KH V+A + ++DDL+ WD +F++ D++T+F L AAN+LN K LL L QTVADMIKG TP+++R+ FNI+ND +P+EE +RREN+WAFE Sbjct: 58 YCNKHHVDAAN------PCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152
BLAST of CX306049 vs. ExPASy Swiss-Prot
Match: ASK17_ARATH (SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.652e-21 Identity = 50/100 (50.00%), Postives = 70/100 (70.00%), Query Frame = -3 Query: 221 YCKKHVEAGSGDKKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAF 517 YCKKHV DD +++ TWDA+FVK +D +TLF L+ AA+YL + GL +L Q +AD KT EIR+ FNI+ND++P+EEEE+R++N+WAF Sbjct: 58 YCKKHV--------DDVEAKNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEWAF 149 The following BLAST results are available for this feature:
BLAST of CX306049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX306049 ID=CX306049; Name=CX306049; organism=Citrus clementina; type=EST; length=519bpback to top |