CX306117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB13B_ARATH (ABC transporter B family member 13 OS=Arabidopsis thaliana GN=ABCB13 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.667e-26 Identity = 55/87 (63.22%), Postives = 72/87 (82.76%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RA++KDP +LLLDEATSALD SE++VQ+ALD++MK RTTV+VAHRLSTI+ AD +AV+ G +VEKG H L++IP+GFY L +L Sbjct: 1155 RAVLKDPSVLLLDEATSALDTSSEKLVQEALDKLMKGRTTVLVAHRLSTIRKADTVAVLHKGRVVEKGSHRELVSIPNGFYKQLTSL 1241 HSP 2 Score: 104.375 bits (259), Expect = 1.907e-22 Identity = 52/85 (61.18%), Postives = 69/85 (81.18%), Query Frame = -1 Query: 48 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLI 302 RA++++PKILLLDEATSALDAESE++VQ ALD VM+ RTT+VVAHRLSTI+N D I V+++G + E G H L+ + G YA+L+ Sbjct: 522 RAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEKRTTIVVAHRLSTIRNVDKIVVLRDGQVRETGSHSELM-LRGGDYATLV 605
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB17B_ARATH (ABC transporter B family member 17 OS=Arabidopsis thaliana GN=ABCB17 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.850e-26 Identity = 58/87 (66.67%), Postives = 70/87 (80.46%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RAI+K PKILLLDEATSALD+ESERVVQ++LD RTT+V+AHRLSTI+NAD+I V+ NG IVE G HE L+ DG Y SL++L Sbjct: 510 RAIIKSPKILLLDEATSALDSESERVVQESLDNASIGRTTIVIAHRLSTIRNADVICVIHNGQIVETGSHEELLKRIDGQYTSLVSL 596 HSP 2 Score: 104.375 bits (259), Expect = 1.907e-22 Identity = 53/88 (60.23%), Postives = 69/88 (78.41%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINI-PDGFYASLIAL 302 RA++K+P +LLLDEATSALD++SERVVQDAL+RVM RT++++AHRLSTI+N DMI V+ G IVE G H +L+ P G Y SL + Sbjct: 1148 RAVLKNPSVLLLDEATSALDSKSERVVQDALERVMVGRTSIMIAHRLSTIQNCDMIVVLGKGKIVESGTHSSLLEKGPTGTYFSLAGI 1235
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: ABCBA_HUMAN (ATP-binding cassette sub-family B member 10, mitochondrial OS=Homo sapiens GN=ABCB10 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.106e-25 Identity = 57/92 (61.96%), Postives = 73/92 (79.35%), Query Frame = -1 Query: 27 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSSAS 302 RA++K+PKILLLDEATSALDAE+E +VQ+ALDR+M RT +V+AHRLSTIKNA+M+AV+ G I E GKHE L++ P+G Y L+ S S Sbjct: 646 RALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEELLSKPNGIYRKLMNKQSFIS 737
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB18B_ARATH (ABC transporter B family member 18 OS=Arabidopsis thaliana GN=ABCB18 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.106e-25 Identity = 58/87 (66.67%), Postives = 68/87 (78.16%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RAI+K P ILLLDEATSALD+ESERVVQ+ALD RTT+V+AHRLSTI+NAD+I VV NG I+E G HE L+ DG Y SL+ L Sbjct: 498 RAIIKSPIILLLDEATSALDSESERVVQEALDNASIGRTTIVIAHRLSTIRNADVICVVHNGRIIETGSHEELLEKLDGQYTSLVRL 584 HSP 2 Score: 105.145 bits (261), Expect = 1.118e-22 Identity = 53/88 (60.23%), Postives = 71/88 (80.68%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLI-NIPDGFYASLIAL 302 RA++K+P +LLLDEATSALD++SE VVQDAL+R+M RT+VV+AHRLSTI+ D IAV++NG +VE G H +L+ P G Y SL++L Sbjct: 1133 RAVLKNPSVLLLDEATSALDSQSESVVQDALERLMVGRTSVVIAHRLSTIQKCDTIAVLENGAVVECGNHSSLLAKGPKGAYFSLVSL 1220
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB22B_ARATH (ABC transporter B family member 22 OS=Arabidopsis thaliana GN=ABCB22 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.363e-25 Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RAI+K P +LLLDEATSALD+ESERVVQ+ALD RTT+V+AHRLSTI+N D+I V KNG IVE G HE L+ DG Y SL+ L Sbjct: 530 RAIIKSPTLLLLDEATSALDSESERVVQEALDNATIGRTTIVIAHRLSTIRNVDVICVFKNGQIVETGSHEELMENVDGQYTSLVRL 616 HSP 2 Score: 100.908 bits (250), Expect = 2.109e-21 Identity = 52/88 (59.09%), Postives = 68/88 (77.27%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLI-NIPDGFYASLIAL 302 RA++K+P +LLLDEATSALD +SER+VQDAL R+M RT+VV+AHRLSTI+N D I V+ G +VE G H +L+ P G Y SL++L Sbjct: 1170 RAVLKNPSVLLLDEATSALDNQSERMVQDALGRLMVGRTSVVIAHRLSTIQNCDTITVLDKGKVVECGTHSSLLAKGPTGVYFSLVSL 1257
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB19B_ARATH (ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.147e-25 Identity = 60/85 (70.59%), Postives = 68/85 (80.00%), Query Frame = -1 Query: 48 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLI 302 RA++KDPKILLLDEATSALDA SE +VQ+ALDRVM RTTVVVAHRL TI+N D IAV++ G +VE G HE LI G YASLI Sbjct: 516 RAMLKDPKILLLDEATSALDASSESIVQEALDRVMVGRTTVVVAHRLCTIRNVDSIAVIQQGQVVETGTHEELI-AKSGAYASLI 599 HSP 2 Score: 110.538 bits (275), Expect = 2.661e-24 Identity = 53/89 (59.55%), Postives = 73/89 (82.02%), Query Frame = -1 Query: 36 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHS 302 RA++K+P +LLLDEATSALDAESE V+Q+AL+R+M+ RTTVVVAHRLSTI+ D I V+++G IVE+G H L++ P+G Y+ L+ L + Sbjct: 1161 RAVLKNPTVLLLDEATSALDAESECVLQEALERLMRGRTTVVVAHRLSTIRGVDCIGVIQDGRIVEQGSHSELVSRPEGAYSRLLQLQT 1249
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB15B_ARATH (ABC transporter B family member 15 OS=Arabidopsis thaliana GN=ABCB15 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.195e-24 Identity = 56/87 (64.37%), Postives = 71/87 (81.61%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RAI+K P ILLLDEATSALD+ESERVVQ+AL+ RTT+++AHRLSTI+NAD+I+VVKNG IVE G H+ L+ DG Y++L+ L Sbjct: 510 RAIIKSPTILLLDEATSALDSESERVVQEALENASIGRTTILIAHRLSTIRNADVISVVKNGHIVETGSHDELMENIDGQYSTLVHL 596 HSP 2 Score: 110.923 bits (276), Expect = 2.038e-24 Identity = 55/92 (59.78%), Postives = 76/92 (82.61%), Query Frame = -1 Query: 30 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINI-PDGFYASLIALHSSA 302 RA++K+P +LLLDEATSALD++SERVVQDAL+RVM RT+VV+AHRLSTI+N D IAV+ G +VE+G H +L++ P G Y SL++L +++ Sbjct: 1148 RAVLKNPSVLLLDEATSALDSQSERVVQDALERVMVGRTSVVIAHRLSTIQNCDAIAVLDKGKLVERGTHSSLLSKGPTGIYFSLVSLQTTS 1239
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: MDR_ORYSJ (Putative multidrug resistance protein OS=Oryza sativa subsp. japonica GN=Os02g0190300 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.560e-24 Identity = 56/90 (62.22%), Postives = 71/90 (78.89%), Query Frame = -1 Query: 33 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSS 302 RAI+K PKILLLDEATSALD ESERVVQ+ALD RTT+V+AHRLSTI+NAD+IAV+++G + E G H+ LI +G Y+SL+ L + Sbjct: 510 RAILKSPKILLLDEATSALDTESERVVQEALDLASMGRTTIVIAHRLSTIRNADIIAVMQSGEVKELGPHDELIANDNGLYSSLVRLQQT 599 HSP 2 Score: 105.145 bits (261), Expect = 1.118e-22 Identity = 56/93 (60.22%), Postives = 72/93 (77.42%), Query Frame = -1 Query: 27 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLI-NIPDGFYASLIALHSSAS 302 RAI+K+P ILLLDEATSALD++SE+VVQ+ALDRVM RT+VVVAHRLSTI+N D+I V++ G +VEKG H +L+ G Y SL+ L + Sbjct: 1148 RAILKNPAILLLDEATSALDSQSEKVVQEALDRVMIGRTSVVVAHRLSTIQNCDLITVLEKGTVVEKGTHASLMAKGLSGTYFSLVNLQQGGN 1240
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB14B_ARATH (ABC transporter B family member 14 OS=Arabidopsis thaliana GN=ABCB14 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.038e-24 Identity = 52/90 (57.78%), Postives = 69/90 (76.67%), Query Frame = -1 Query: 33 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIALHSS 302 RA++KDP +LLLDEATSALD +E+ VQ+ALD++MK RTT++VAHRLSTI+ AD I V+ G +VEKG H L++ DGFY L +L + Sbjct: 1157 RAVLKDPSVLLLDEATSALDTSAEKQVQEALDKLMKGRTTILVAHRLSTIRKADTIVVLHKGKVVEKGSHRELVSKSDGFYKKLTSLQEA 1246 HSP 2 Score: 104.76 bits (260), Expect = 1.460e-22 Identity = 52/85 (61.18%), Postives = 69/85 (81.18%), Query Frame = -1 Query: 48 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLI 302 RA++++PKILLLDEATSALDAESE++VQ ALD VM+ RTT+V+AHRLSTI+N D I V+++G + E G H LI+ G YA+L+ Sbjct: 523 RAVLRNPKILLLDEATSALDAESEKIVQQALDNVMEKRTTIVIAHRLSTIRNVDKIVVLRDGQVRETGSHSELIS-RGGDYATLV 606
BLAST of CX306117 vs. ExPASy Swiss-Prot
Match: AB16B_ARATH (ABC transporter B family member 16 OS=Arabidopsis thaliana GN=ABCB16 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.540e-24 Identity = 57/87 (65.52%), Postives = 68/87 (78.16%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLINIPDGFYASLIAL 302 RA++K P ILLLDEATSALD ESERVVQ+ALD RTT+V+AHRLSTI+NAD+I V+ NG IVE G H+ L+ I DG Y SL+ L Sbjct: 497 RALIKSPIILLLDEATSALDLESERVVQEALDNASVGRTTIVIAHRLSTIRNADIICVLHNGCIVETGSHDKLMEI-DGKYTSLVRL 582 HSP 2 Score: 103.605 bits (257), Expect = 3.253e-22 Identity = 54/88 (61.36%), Postives = 69/88 (78.41%), Query Frame = -1 Query: 42 RAIVKDPKILLLDEATSALDAESERVVQDALDRVMKNRTTVVVAHRLSTIKNADMIAVVKNGVIVEKGKHENLI-NIPDGFYASLIAL 302 R I+K+P ILLLDEATSALD++SERVVQDAL+ VM +T+VV+AHRLSTI+N D IAV+ G +VE G H +L+ P G Y SL++L Sbjct: 1134 RTILKNPSILLLDEATSALDSQSERVVQDALEHVMVGKTSVVIAHRLSTIQNCDTIAVLDKGKVVESGTHASLLAKGPTGSYFSLVSL 1221 The following BLAST results are available for this feature:
BLAST of CX306117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 313
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306117 ID=CX306117; Name=CX306117; organism=Citrus clementina; type=EST; length=302bpback to top |