CX306158
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM2_DIACA (S-adenosylmethionine decarboxylase proenzyme 2 OS=Dianthus caryophyllus GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.376e-33 Identity = 66/93 (70.97%), Postives = 82/93 (88.17%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG-NISLRDIQFLL 296 EMCMTGLD+++ASVF+K+ +SAA+MTE SGIRKILP S ICDF+F+PCGYSMN+IEG AVSTIH+TPEDGFSYASFEAVG ++ + D+ L+ Sbjct: 195 EMCMTGLDKEKASVFFKSQSASAAVMTESSGIRKILPDSVICDFDFEPCGYSMNAIEGPAVSTIHITPEDGFSYASFEAVGYDLQVVDLNLLV 287
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM1_BRAJU (S-adenosylmethionine decarboxylase proenzyme 1 OS=Brassica juncea GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.103e-33 Identity = 64/81 (79.01%), Postives = 74/81 (91.36%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG 263 EMCM+GLD+ +ASVF+K SSA MT++SGIRKILP+S+ICDFEF+PCGYSMNS+EGDA STIHVTPEDGFSYASFEAVG Sbjct: 183 EMCMSGLDKDKASVFFKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGDASSTIHVTPEDGFSYASFEAVG 263
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 5.293e-33 Identity = 64/81 (79.01%), Postives = 74/81 (91.36%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG 263 EMCMTGLD+K ASVF+KT SSAA+MT+ SGIRKILP SEICDF+F+PCGYSMN++EG A+S IHVTPEDGFSYASFEA+G Sbjct: 183 EMCMTGLDKKSASVFFKTQSSSAAVMTDASGIRKILPGSEICDFDFEPCGYSMNAVEGGAISPIHVTPEDGFSYASFEAMG 263
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 6.913e-33 Identity = 63/81 (77.78%), Postives = 74/81 (91.36%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG 263 EMCMTGLD+K ASVF+KT SSAA+MT+ SGIRKILP S+ICDF+F+PCGYSMN++EG +STIHVTPEDGFSYASFEA+G Sbjct: 183 EMCMTGLDKKSASVFFKTQSSSAAVMTDASGIRKILPGSDICDFDFEPCGYSMNAVEGGTISTIHVTPEDGFSYASFEAMG 263
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM1_DIACA (S-adenosylmethionine decarboxylase proenzyme 1 OS=Dianthus caryophyllus GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 6.913e-33 Identity = 66/93 (70.97%), Postives = 81/93 (87.10%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG-NISLRDIQFLL 296 EMCMTGLD+ +ASVF+K+ +SAA+MTE SGIRKILP S ICDF+F+PCGYSMN+IEG AVSTIH+TPEDGFSYASFEAVG ++ + D+ L+ Sbjct: 204 EMCMTGLDKGKASVFFKSESASAAVMTETSGIRKILPDSAICDFDFEPCGYSMNAIEGPAVSTIHITPEDGFSYASFEAVGYDLKIVDVNQLV 296
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM3_BRAJU (S-adenosylmethionine decarboxylase proenzyme 3 OS=Brassica juncea GN=SAMDC3 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.028e-33 Identity = 69/96 (71.88%), Postives = 83/96 (86.46%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSA--AMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG-NISLRDIQFLLT 299 EMCMTGLD+++ASVFYK NE+ MT++SGIRKILPKS+ICDFEF+PCGYSMNS+EGDA+STIHVTPEDGFSYASFEAVG + + D+ L+T Sbjct: 182 EMCMTGLDKEKASVFYK-NETGGENGSMTDNSGIRKILPKSQICDFEFEPCGYSMNSVEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVT 276
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_DAUCA (S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.011e-32 Identity = 64/92 (69.57%), Postives = 78/92 (84.78%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG----NISLRDI 284 EMCMT L+R +ASVFYKTN SSA +T++SG+R ILP S ICDFEFDPCGYSMN++EG AVSTIH+TPEDGFSY+SFEAVG +++L D+ Sbjct: 183 EMCMTSLNRDKASVFYKTNSSSATSVTDNSGLRDILPNSRICDFEFDPCGYSMNAVEGPAVSTIHITPEDGFSYSSFEAVGYDPKSVNLSDL 274
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_VICFA (S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.431e-32 Identity = 63/81 (77.78%), Postives = 71/81 (87.65%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG 263 EMCMTGLDR++ASVF+K SAA MT +SGIRKILP SEICDF+F+PCGYSMNS+EG AVSTIH+TPEDGFSYASFE G Sbjct: 181 EMCMTGLDREKASVFFKQQTGSAAEMTVNSGIRKILPNSEICDFDFEPCGYSMNSVEGPAVSTIHITPEDGFSYASFETAG 261
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_SPIOL (S-adenosylmethionine decarboxylase proenzyme OS=Spinacia oleracea GN=SAMDC PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.852e-32 Identity = 61/81 (75.31%), Postives = 74/81 (91.36%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG 263 EMCMTGL +++ASVF+K+ +AA+MTE SGIRKILP S+ICDF+F+PCGYSMN+IEG A+STIH+TPEDGFSYASFEAVG Sbjct: 181 EMCMTGLKKEKASVFFKSQSPNAAVMTESSGIRKILPDSKICDFDFEPCGYSMNAIEGPAISTIHITPEDGFSYASFEAVG 261
BLAST of CX306158 vs. ExPASy Swiss-Prot
Match: DCAM_PEA (S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.904e-31 Identity = 62/81 (76.54%), Postives = 70/81 (86.42%), Query Frame = 3 Query: 21 EMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVG 263 EMCMTGLDR++ASVF+K SAA MT +SGIRKIL SEICDF+F+PCGYSMNS+EG AVSTIH+TPEDGFSYASFE G Sbjct: 181 EMCMTGLDREKASVFFKEQTGSAAEMTVNSGIRKILRNSEICDFDFEPCGYSMNSVEGSAVSTIHITPEDGFSYASFETAG 261 The following BLAST results are available for this feature:
BLAST of CX306158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX306158 ID=CX306158; Name=CX306158; organism=Citrus clementina; type=EST; length=368bpback to top |