CX306165

Overview
NameCX306165
Unique NameCX306165
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
Drought1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX306165 vs. ExPASy Swiss-Prot
Match: CAMT_CITNA (Caffeoyl-CoA O-methyltransferase OS=Citrus natsudaidai PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.131e-48
Identity = 90/126 (71.43%), Postives = 107/126 (84.92%), Query Frame = -1
Query:  175 LPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 552
            LP I+KAGVAH+I FREGPALP+LDQL++D+K HGT+DF+FVDADK+NYINYHKR+I+LVKVGG+IGYDNTLW GSVV  PDA + + +   RD V EL KALAVDPRIEIC L + DG+TL RRI
Sbjct:  106 LPKIEKAGVAHRIQFREGPALPVLDQLVEDKKNHGTYDFIFVDADKDNYINYHKRIIDLVKVGGLIGYDNTLWNGSVVGPPDAPMRKYLRYCRDFVLELIKALAVDPRIEICMLPVGDGITLSRRI 231          
BLAST of CX306165 vs. ExPASy Swiss-Prot
Match: CAMT1_MAIZE (Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays GN=CCOAOMT1 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.570e-47
Identity = 89/126 (70.63%), Postives = 106/126 (84.13%), Query Frame = -1
Query:  175 LPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 552
            LP I+KAGVAHKIDFREGPALP+LD LI +EK HG+FDFVFVDADK+NY+NYH+RL++LVK+GG+IGYDNTLW GSVV   DA + + I  +RD V  LNKALA D R+EICQL + DGVTLCRR+
Sbjct:  132 LPCIEKAGVAHKIDFREGPALPVLDDLIAEEKNHGSFDFVFVDADKDNYLNYHERLLKLVKLGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLVLNKALAADDRVEICQLPVGDGVTLCRRV 257          
BLAST of CX306165 vs. ExPASy Swiss-Prot
Match: CAMT2_MAIZE (Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 9.523e-45
Identity = 83/126 (65.87%), Postives = 101/126 (80.16%), Query Frame = -1
Query:  175 LPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 552
            LP I KAGV HKIDFREGPALP+LD L+ D++ HG+FDF FVDADK+NY+NYH+RL++LV+ GG+IGYDNTLW GSVV   DA + + I  +RD V  LN ALA D R+EICQL + DGVTLCRR+
Sbjct:  138 LPCINKAGVGHKIDFREGPALPVLDDLVADKEQHGSFDFAFVDADKDNYLNYHERLLKLVRPGGLIGYDNTLWNGSVVLPDDAPMRKYIRFYRDFVLALNSALAADDRVEICQLPVGDGVTLCRRV 263          
BLAST of CX306165 vs. ExPASy Swiss-Prot
Match: CAMT3_ARATH (Probable caffeoyl-CoA O-methyltransferase At4g26220 OS=Arabidopsis thaliana GN=At4g26220 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.628e-36
Identity = 72/126 (57.14%), Postives = 95/126 (75.40%), Query Frame = -1
Query:  175 LPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 552
            LP+I+KAGV HKIDF+E  ALP LD+L+ ++   G FDF FVDADK NY NYH+RLI L+KVGG+I YDNTLWGGS VA+PD+   E  +  + +  ELNK L+ D R++I Q ++ DG+T+CRR+
Sbjct:  107 LPVIKKAGVEHKIDFKESEALPALDELLNNKVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGGIIVYDNTLWGGS-VAEPDSSTPEWRIEVKKATLELNKKLSADQRVQISQAALGDGITICRRL 231          
BLAST of CX306165 vs. ExPASy Swiss-Prot
Match: CAMT_STELP (Caffeoyl-CoA O-methyltransferase OS=Stellaria longipes PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.092e-32
Identity = 67/126 (53.17%), Postives = 90/126 (71.43%), Query Frame = -1
Query:  175 LPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 552
            L +I+KAGV  KI F    A+ LLD L+ D +Y G++DF FVDADK NY+NYH+RLIELVKVGG+I YDNTLWGG+ VA P++++ + +      V +LN+ L  D RI+I  L + DG+T CRR+
Sbjct:  116 LALIKKAGVESKISFIVSDAMTLLDDLLADGRYQGSYDFAFVDADKTNYVNYHERLIELVKVGGIIAYDNTLWGGT-VALPESEVPDFMKNNWVCVTKLNEILGSDARIDIAHLPVGDGITFCRRV 240          
BLAST of CX306165 vs. ExPASy Swiss-Prot
Match: CAMT1_ARATH (Putative caffeoyl-CoA O-methyltransferase At1g67980 OS=Arabidopsis thaliana GN=At1g67980 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.974e-30
Identity = 65/126 (51.59%), Postives = 91/126 (72.22%), Query Frame = -1
Query:  175 LPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 552
            L  I+KAGV HKI+F     L  LDQL+ D+     FDF F DADK++Y+N+H+RL++LVKVGG+I +DNTLW G  VA+ +  + E +  +R ++ E NK LA+DPR+E+ Q+SI DG+TLCRR+
Sbjct:  110 LEFIKKAGVDHKINFIHSDGLKALDQLVNDKC---EFDFAFADADKSSYVNFHERLLKLVKVGGIIAFDNTLWFG-FVAEDEDGVPEHMREYRAALIEFNKKLALDPRVEVSQISIGDGITLCRRL 231          
BLAST of CX306165 vs. ExPASy Swiss-Prot
Match: CAMT_POPKI (Caffeoyl-CoA O-methyltransferase OS=Populus kitakamiensis PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.653e-30
Identity = 64/126 (50.79%), Postives = 91/126 (72.22%), Query Frame = -1
Query:  175 LPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 552
            LP IQKAGV  KI+F +  A P+L++++ ++K    FDF FVDADK++Y +YH++L++LVK+GG+I YDNTLW G V  + D ++ E +   R  + E NK L+ D R+EI Q+SI DGVTLCRR+
Sbjct:  110 LPFIQKAGVEDKINFIQSEAPPILNEMLCNDK-QPEFDFAFVDADKSSYKHYHEQLLKLVKIGGIIAYDNTLWYGLVAKEVDDEVPEPLRMVRTVIMEFNKLLSSDLRVEISQISIGDGVTLCRRL 234          
BLAST of CX306165 vs. ExPASy Swiss-Prot
Match: CAMT2_ARATH (Probable caffeoyl-CoA O-methyltransferase At1g67990 OS=Arabidopsis thaliana GN=At1g67990 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.131e-28
Identity = 62/126 (49.21%), Postives = 92/126 (73.02%), Query Frame = -1
Query:  175 LPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 552
            L  ++KAGV HKI+F +  A+  LDQL+  EK    +DF FVDADK NY+ + ++L++LVKVGG+I +DNTLW G+++ Q + ++   +  +R+++ E NK LA DPR+EI Q+SI DG+TLCRR+
Sbjct:  110 LEFMKKAGVDHKINFIQSDAVRGLDQLLNGEKQE--YDFAFVDADKTNYVYFLEKLLKLVKVGGIIAFDNTLWFGTLI-QKENEVPGHMRAYREALLEFNKILARDPRVEIAQISIGDGLTLCRRL 232          
BLAST of CX306165 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.693e-17
Identity = 53/124 (42.74%), Postives = 76/124 (61.29%), Query Frame = -1
Query:  178 PIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRR 549
            P  Q+AGV   ID R G A   L +L ++    G FD VFVDADK  Y++Y+++ + LV+ GG++  DNTL+ G  VA P AD  + +     +V+ LN  L  D R++I  L++ADG+TL RR
Sbjct:  103 PFWQRAGVDGLIDLRIGDAARTLAEL-RERDGDGAFDLVFVDADKAGYLHYYEQALALVRPGGLVAIDNTLFFGR-VADPAADDPDTV-----AVRTLNDLLRDDERVDIALLTVADGITLARR 219          
BLAST of CX306165 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.871e-16
Identity = 48/121 (39.67%), Postives = 74/121 (61.16%), Query Frame = -1
Query:  175 KAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKVGGVIGYDNTLWGGSVVAQPDADLDELILGWRDSVQELNKALAVDPRIEICQLSIADGVTLCRRI 537
            KAGV HKI+ +  PA   L +LI D+    T+DFVF+DADK  Y  Y++  ++L++ GG+I  DN L  G  VA P+A+++  ++    +++ LN  +  D R+    L IADG+TL  +I
Sbjct:  115 KAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGGIIAIDNVLQHGR-VADPNANVEPNLV----AIRALNDKILADKRVTKTMLPIADGITLVTKI 229          
The following BLAST results are available for this feature:
BLAST of CX306165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CAMT_CITNA4.131e-4871.43Caffeoyl-CoA O-methyltransferase OS=Citrus natsuda... [more]
CAMT1_MAIZE1.570e-4770.63Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays GN=... [more]
CAMT2_MAIZE9.523e-4565.87Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=... [more]
CAMT3_ARATH1.628e-3657.14Probable caffeoyl-CoA O-methyltransferase At4g2622... [more]
CAMT_STELP1.092e-3253.17Caffeoyl-CoA O-methyltransferase OS=Stellaria long... [more]
CAMT1_ARATH2.974e-3051.59Putative caffeoyl-CoA O-methyltransferase At1g6798... [more]
CAMT_POPKI8.653e-3050.79Caffeoyl-CoA O-methyltransferase OS=Populus kitaka... [more]
CAMT2_ARATH2.131e-2849.21Probable caffeoyl-CoA O-methyltransferase At1g6799... [more]
MDMC_STRMY1.693e-1742.74O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]
CAMT1_DICDI1.871e-1639.67Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionC18014G07Rv Drought1 Citrus clementina cDNA clone C18014G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX306165 ID=CX306165; Name=CX306165; organism=Citrus clementina; type=EST; length=552bp
TTTTTTTTTTTTTTTTTTTTTAAAAATTTATTAACTTAAGAAAAACAATA
ATACATTTCTCCAAACACTCATCGGTCTAATTTATTTGTGGATTTTACTG
TCATAACCACACATAGTATAGTTTAAAAGTTACGACACAACCAGTCTCGT
GAGTGAAAATTGAGAGGATCAGCCAATGCGACGACATAATGTAACCCCAT
CAGCAATGGAGAGCTGGCAAATCTCAATCCTTGGATCAACGGCCAGGGCC
TTGTTGAGTTCCTGCACAGAATCCCTCCAGCCTAAGATTAGCTCATCCAG
GTCGGCATCAGGTTGTGCCACCACAGATCCACCCCACAAGGTGTTGTCGT
AGCCAATCACTCCCCCAACCTTCACAAGCTCAATAAGCCTCTTGTGGTAA
TTAATGTAGTTATTCTTGTCAGCATCAACAAAGACGAAGTCGAATGTCCC
ATGATATTTTTCGTCTTGGATCAATTGATCAAGAAGAGGAAGAGCAGGGC
CTTCTCTGAAATCAATCTTGTGGGCAACACCAGCTTTTTGAATTATAGGG
AG
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