CX306168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_SYNY3 (Photosystem I reaction center subunit XI OS=Synechocystis sp. (strain PCC 6803) GN=psaL PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.185e-20 Identity = 46/110 (41.82%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 205 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGL 534 QV+Q NGDPF+G L TPI+ S ++ NLPAYR +SP+LRG+EVG+AHG+ L+GP+ GPLR++E +++ + L+ YG+ +F +GE + L Sbjct: 6 QVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPWTLLGPLRDSEYQYIGGLIGALALILVATAALSSYGLVTF-QGEQGSGDTL 114
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_MICAN (Photosystem I reaction center subunit XI OS=Microcystis aeruginosa (strain NIES-843) GN=psaL PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.021e-20 Identity = 48/108 (44.44%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 205 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAP 528 QV+ P N DPFIG L TPI++S ++ NLPAYR ++P+LRG+EVG+AHG+ L GP+V GPLR++E V++ + CL YG+ SF S P Sbjct: 8 QVVTPYNDDPFIGHLATPISASGFTKAFIGNLPAYRPGLAPILRGLEVGMAHGYFLGGPWVVLGPLRDSEYANIGGLIPALAMVLLATGCLASYGLVSFQGKAASNDP 115
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_MASLA (Photosystem I reaction center subunit XI OS=Mastigocladus laminosus GN=psaL PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.447e-20 Identity = 50/113 (44.25%), Postives = 66/113 (58.41%), Query Frame = 1 Query: 148 SKRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 486 SK SP S+ +V+ P DP IG LETPI SSPL+ W++ NLPAYR ++ RG+EVG+AHG+ + GPF K GPLRNT ++IL+ LT+Y Sbjct: 8 SKNSP--------SDPRNREVVFPAYRDPQIGDLETPINSSPLVKWFIGNLPAYRPGITTFRRGLEVGMAHGYWIFGPFAKLGPLRNTVNANLAGLLSALGLIIILTGALTLY 112
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_ANASP (Photosystem I reaction center subunit XI OS=Anabaena sp. (strain PCC 7120) GN=psaL PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.880e-20 Identity = 46/122 (37.70%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 175 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTL 540 K + S+ +V+ P DP G+LETP+ +SPL+ W+++NLPAYR ++P RG+EVG+AHG+ L GPF K GPLR+ VV+ ++ L++Y N P+ +T+ Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLALSLYA----NSNPPTALASVTV 126
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_ANAVT (Photosystem I reaction center subunit XI OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaL PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.003e-19 Identity = 46/122 (37.70%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 175 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTL 540 K + S+ +V+ P DP G+LETP+ +SPL+ W+++NLPAYR ++P RG+EVG+AHG+ L GPF K GPLR+ VV+ ++ L++Y N P +T+ Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLSLSLYA----NSNPPKALASVTV 126
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_SYNE7 (Photosystem I reaction center subunit XI OS=Synechococcus elongatus (strain PCC 7942) GN=psaL PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.387e-18 Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 226 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIA 495 G P IG+L TPI SSP +++ LP YR +S RG+E+G+AHGFLL GPF GPLRNTE VVIL++CL++YG A Sbjct: 10 GTPEIGNLATPINSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPFSILGPLRNTETAGSAGLLATVGLVVILTVCLSLYGNA 99
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_CYAA5 (Photosystem I reaction center subunit XI OS=Cyanothece sp. (strain ATCC 51142) GN=psaL PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.355e-16 Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 1 Query: 226 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEP 516 GDP IG+L TP+ SS L ++ NLPAYR +S RG+EVG+AHG+ L GPF GPLRNTE + IL+I L++Y AS G+P Sbjct: 8 GDPQIGNLATPVNSSRLSLAFIRNLPAYRRGLSANRRGLEVGMAHGYFLYGPFAILGPLRNTEYASTGGLLSAVAMISILTIALSLY--ASVEVGKP 102
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_SYNP6 (Photosystem I reaction center subunit XI OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=psaL PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 2.312e-16 Identity = 43/90 (47.78%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 226 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIA 495 G P IG L TP SSP +++ LP YR +S RG+E+G+AHGFLL GP GPLRNTE VVIL++CL++YG A Sbjct: 9 GTPEIGDLATPTNSSPFTRTFINALPIYRRGLSSNRRGLEIGMAHGFLLYGPLSILGPLRNTETAGSAGLLATVGLVVILTVCLSLYGNA 98
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_PROM4 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9211) GN=psaL PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.556e-15 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 211 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 486 ++P++ DPF+G+LETP+ S +++NLP YR+ +SP RG+EVG A G+LL GPF GPLRNT+ V IL+ +Y Sbjct: 39 VKPVS-DPFVGNLETPVNSGYFTKAFINNLPFYRSGISPNFRGLEVGAAFGYLLYGPFAMTGPLRNTDFALTAGLLSTIGAVHILTALFVLY 129
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_SYNP2 (Photosystem I reaction center subunit XI OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=psaL PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.269e-14 Identity = 36/88 (40.91%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 226 GDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYG 489 GDP +G+L TPI +S +++NLP YR +S RG+EVG+AHG+ L GPF GPLRN + + +L++ L++YG Sbjct: 8 GDPQVGNLATPINASAFSKAFINNLPGYRQGLSAQRRGLEVGMAHGYFLYGPFALLGPLRNADFAGVAGLLGTVGLISLLTLALSLYG 95 The following BLAST results are available for this feature:
BLAST of CX306168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306168 ID=CX306168; Name=CX306168; organism=Citrus clementina; type=EST; length=542bpback to top |