CX306168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_GLOVI (Photosystem I reaction center subunit XI OS=Gloeobacter violaceus GN=psaL PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.074e-13 Identity = 39/97 (40.21%), Postives = 56/97 (57.73%), Query Frame = 1 Query: 229 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPS 519 DP G+L TP+ +S I W++ NLP R + RG+E+G+AHG+ L+GPF GPLRNTE+ ++I +I L+ G AS E P+ Sbjct: 11 DPQEGTLLTPVNNSTAIRWFIDNLPINRVGMDEFTRGLEIGMAHGYWLIGPFALLGPLRNTELGLVAGLVSTIGLLLISTIGLS--GYASLVEDVPT 105
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_PROMA (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus GN=psaL PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.125e-13 Identity = 38/92 (41.30%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 211 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 486 + P++ DP +G+L TP+ S +L+NLP YR +SP RG+EVG A G+LL GP+ GPLRNT+ V IL+ L +Y Sbjct: 39 VTPVS-DPCVGNLSTPVNSGYFTKAFLNNLPFYRGGLSPNFRGLEVGAAFGYLLYGPYAMTGPLRNTDYALTAGLLGTIGAVHILTALLVLY 129
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_PROMS (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain AS9601) GN=psaL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.330e-13 Identity = 36/86 (41.86%), Postives = 48/86 (55.81%), Query Frame = 1 Query: 229 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 486 DP +G+L TP+ S +++NLP YR +SP RG+E G A G+LL GPF GPLRN+E V IL+ L +Y Sbjct: 44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSEFALTAGLLAAIGAVHILTALLVLY 129
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_PROM2 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9215) GN=psaL PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.092e-13 Identity = 35/86 (40.70%), Postives = 48/86 (55.81%), Query Frame = 1 Query: 229 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 486 DP +G+L TP+ S +++NLP YR +SP RG+E G A G+LL GPF GPLRN+E V I++ L +Y Sbjct: 44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSEFAVTAGLLSAIGAVHIMTALLVLY 129
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_PROM0 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9301) GN=psaL PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.551e-12 Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 1 Query: 229 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 486 DP +G+L TP+ S +++NLP YR +SP RG+E G A G+LL GPF GPLRN+E V IL+ +Y Sbjct: 44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSEFALTAGLLATIGAVHILTALFVLY 129
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_PROMP (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=psaL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.025e-12 Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 211 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 486 ++P++ DP +G+L TP+ S +++NLP YR +SP RG+E G A G+LL GPF GPLRN++ V IL+ L +Y Sbjct: 39 VKPVS-DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFSMTGPLRNSDFALTAGLLATIGAVHILTGLLVLY 129
BLAST of CX306168 vs. ExPASy Swiss-Prot
Match: PSAL_PROM5 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9515) GN=psaL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.025e-12 Identity = 34/86 (39.53%), Postives = 48/86 (55.81%), Query Frame = 1 Query: 229 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIY 486 DP +G+L TP+ S +++NLP YR +SP RG+E G A G+LL GPF GPLRN++ V I++ L +Y Sbjct: 44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSDFAITAGLLAAIGAVHIMTALLVLY 129 The following BLAST results are available for this feature:
BLAST of CX306168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX306168 ID=CX306168; Name=CX306168; organism=Citrus clementina; type=EST; length=542bpback to top |