CX306174
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306174 vs. ExPASy Swiss-Prot
Match: RL18A_MOUSE (60S ribosomal protein L18a OS=Mus musculus GN=Rpl18a PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.746e-28 Identity = 54/98 (55.10%), Postives = 75/98 (76.53%), Query Frame = 1 Query: 106 QYQVVGRALPTESDEHPTIYRMKLWATNEVRAKSKFWYFLRKLKKVKISNGHMLAINEIFEKNPTKIKNYGFWLRYHSRTGYHNMYKEYRDTTLNGAV 399 +Y+VVGR LPT P +YRM+++A N V AKS+FWYF+ +LKK+K S+G ++ ++FEK+P ++KN+G WLRY SR+G HNMY+EYRD T GAV Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAV 106
BLAST of CX306174 vs. ExPASy Swiss-Prot
Match: RL18A_HUMAN (60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.746e-28 Identity = 54/98 (55.10%), Postives = 75/98 (76.53%), Query Frame = 1 Query: 106 QYQVVGRALPTESDEHPTIYRMKLWATNEVRAKSKFWYFLRKLKKVKISNGHMLAINEIFEKNPTKIKNYGFWLRYHSRTGYHNMYKEYRDTTLNGAV 399 +Y+VVGR LPT P +YRM+++A N V AKS+FWYF+ +LKK+K S+G ++ ++FEK+P ++KN+G WLRY SR+G HNMY+EYRD T GAV Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAV 106
BLAST of CX306174 vs. ExPASy Swiss-Prot
Match: RL18A_BOVIN (60S ribosomal protein L18a OS=Bos taurus GN=RPL18A PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.746e-28 Identity = 54/98 (55.10%), Postives = 75/98 (76.53%), Query Frame = 1 Query: 106 QYQVVGRALPTESDEHPTIYRMKLWATNEVRAKSKFWYFLRKLKKVKISNGHMLAINEIFEKNPTKIKNYGFWLRYHSRTGYHNMYKEYRDTTLNGAV 399 +Y+VVGR LPT P +YRM+++A N V AKS+FWYF+ +LKK+K S+G ++ ++FEK+P ++KN+G WLRY SR+G HNMY+EYRD T GAV Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAV 106
BLAST of CX306174 vs. ExPASy Swiss-Prot
Match: RL20_SCHPO (60S ribosomal protein L20 OS=Schizosaccharomyces pombe GN=rpl20a PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 6.636e-28 Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 1 Query: 106 QYQVVGRALPTESDEHPTIYRMKLWATNEVRAKSKFWYFLRKLKKVKISNGHMLAINEIFEKNPTKIKNYGFWLRYHSRTGYHNMYKEYRDTTLNGAV 399 +YQVVGR +PTE + P ++RM+L+A NE AKS++WYFL+ + KVK + G ++AINEI E P K K +G W+RY SR+G HNMYKE+RDTT GAV Sbjct: 5 EYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAV 102
BLAST of CX306174 vs. ExPASy Swiss-Prot
Match: RL18A_DANRE (60S ribosomal protein L18a OS=Danio rerio GN=rpl18a PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.478e-27 Identity = 52/98 (53.06%), Postives = 76/98 (77.55%), Query Frame = 1 Query: 106 QYQVVGRALPTESDEHPTIYRMKLWATNEVRAKSKFWYFLRKLKKVKISNGHMLAINEIFEKNPTKIKNYGFWLRYHSRTGYHNMYKEYRDTTLNGAV 399 +Y+VVGR LP+ + P +YRM+++A N V AKS+FWYF+ +L+K+K ++G ++ +FEK+P K+KN+G WLRY SR+G HNMY+EYRD T +GAV Sbjct: 9 EYKVVGRLLPSVKNPAPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKASGEIVYCGLVFEKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAV 106
BLAST of CX306174 vs. ExPASy Swiss-Prot
Match: RL18A_ICTPU (60S ribosomal protein L18a OS=Ictalurus punctatus GN=rpl18a PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.582e-27 Identity = 51/98 (52.04%), Postives = 74/98 (75.51%), Query Frame = 1 Query: 106 QYQVVGRALPTESDEHPTIYRMKLWATNEVRAKSKFWYFLRKLKKVKISNGHMLAINEIFEKNPTKIKNYGFWLRYHSRTGYHNMYKEYRDTTLNGAV 399 +Y+VVGR LP+ + P +YRM+++A N V AKS+FWYF+ +L+K+K +NG + + E++P K+KN+G WLRY SR+G HNMY+EYRD T +GAV Sbjct: 9 EYKVVGRLLPSAKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVHEQSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAV 106
BLAST of CX306174 vs. ExPASy Swiss-Prot
Match: RL18A_SALSA (60S ribosomal protein L18a OS=Salmo salar GN=rpl18a PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.026e-25 Identity = 50/98 (51.02%), Postives = 71/98 (72.45%), Query Frame = 1 Query: 106 QYQVVGRALPTESDEHPTIYRMKLWATNEVRAKSKFWYFLRKLKKVKISNGHMLAINEIFEKNPTKIKNYGFWLRYHSRTGYHNMYKEYRDTTLNGAV 399 +Y+VVGR LP+ + P +YRM+++A N V AKS+FWYF+ +L+K+K +NG + + EK P K+KN+G WLR SR+G HNMY+EYRD T + AV Sbjct: 9 EYKVVGRLLPSVKNPTPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKANGETVYCGLVHEKTPLKVKNFGVWLRNDSRSGTHNMYREYRDLTTSAAV 106 The following BLAST results are available for this feature:
BLAST of CX306174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306174 ID=CX306174; Name=CX306174; organism=Citrus clementina; type=EST; length=400bpback to top |