CX306342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306342 vs. ExPASy Swiss-Prot
Match: RS27A_KLULA (40S ribosomal protein S27a OS=Kluyveromyces lactis GN=ubi3 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.273e-12 Identity = 34/53 (64.15%), Postives = 37/53 (69.81%), Query Frame = -3 Query: 196 LAVLQFYKVDGSGKVQGLRKECPNAECGAGTFMTNHFDRHYCGKCGLTYVYQK 354 LAVL +YKVD GKV LRKECPN CG G F+ NH DR YCGKC T+ QK Sbjct: 24 LAVLNYYKVDDEGKVAKLRKECPN--CGPGIFLANHGDRFYCGKCHSTFATQK 74
BLAST of CX306342 vs. ExPASy Swiss-Prot
Match: RS27A_PLUXY (40S ribosomal protein S27a OS=Plutella xylostella PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.837e-12 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = -3 Query: 199 LAVLQFYKVDGSGKVQGLRKECPNAECGAGTFMTNHFDRHYCGKCGLTYVYQ 354 LAVL+FYKVD +GK+ LR+EC + +CGAG FM DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTSEQCGAGVFMAVMEDRHYCGKCHRTMVFK 75
BLAST of CX306342 vs. ExPASy Swiss-Prot
Match: RS37_YEAST (40S ribosomal protein S31 OS=Saccharomyces cerevisiae GN=UBI3 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 3.705e-12 Identity = 31/49 (63.27%), Postives = 34/49 (69.39%), Query Frame = -3 Query: 208 LAVLQFYKVDGSGKVQGLRKECPNAECGAGTFMTNHFDRHYCGKCGLTY 354 LAVL +YKVD GKV LR+EC N CGAG F+ NH DR YCGKC Y Sbjct: 24 LAVLSYYKVDAEGKVTKLRRECSNPTCGAGVFLANHKDRLYCGKCHSVY 72
BLAST of CX306342 vs. ExPASy Swiss-Prot
Match: RS27A_SPOFR (40S ribosomal protein S27a OS=Spodoptera frugiperda PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.705e-12 Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = -3 Query: 199 LAVLQFYKVDGSGKVQGLRKECPNAECGAGTFMTNHFDRHYCGKCGLTYVYQ 354 LAVL+FYKVD +GK+ LR+EC +CGAG FM DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFK 75
BLAST of CX306342 vs. ExPASy Swiss-Prot
Match: RS27A_MANSE (40S ribosomal protein S27a OS=Manduca sexta PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.705e-12 Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = -3 Query: 199 LAVLQFYKVDGSGKVQGLRKECPNAECGAGTFMTNHFDRHYCGKCGLTYVYQ 354 LAVL+FYKVD +GK+ LR+EC +CGAG FM DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFK 75
BLAST of CX306342 vs. ExPASy Swiss-Prot
Match: RS27A_CAEBR (40S ribosomal protein S27a OS=Caenorhabditis briggsae GN=ubl-1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.408e-11 Identity = 30/54 (55.56%), Postives = 36/54 (66.67%), Query Frame = -3 Query: 193 LAVLQFYKVDGSGKVQGLRKECPNAECGAGTFMTNHFDRHYCGKCGLTYVYQKA 354 LAVL++YKVD +GK+ LRKEC CG G FM H +RHYCG+C T V A Sbjct: 24 LAVLKYYKVDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVDTA 77
BLAST of CX306342 vs. ExPASy Swiss-Prot
Match: RS27A_CAEEL (40S ribosomal protein S27a OS=Caenorhabditis elegans GN=ubl-1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.839e-11 Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = -3 Query: 193 LAVLQFYKVDGSGKVQGLRKECPNAECGAGTFMTNHFDRHYCGKCGLTYVYQKA 354 LAVL++YK+D +GK+ LRKEC CG G FM H +RHYCG+C T V A Sbjct: 24 LAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVDTA 77
BLAST of CX306342 vs. ExPASy Swiss-Prot
Match: RS27B_SCHPO (40S ribosomal protein S27b OS=Schizosaccharomyces pombe GN=ubi5 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.401e-11 Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = -3 Query: 211 LAVLQFYKVDGSGKVQGLRKECPNAECGAGTFMTNHFDRHYCGKCGLT 354 LAVL++YKV+ G V+ LR+ECPN CGA TFM NH DR YCG+C LT Sbjct: 24 LAVLKYYKVEDDGSVKRLRRECPN--CGASTFMANHKDRLYCGRCHLT 69
BLAST of CX306342 vs. ExPASy Swiss-Prot
Match: RS27A_SCHPO (40S ribosomal protein S27a OS=Schizosaccharomyces pombe GN=ubi3 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.401e-11 Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = -3 Query: 211 LAVLQFYKVDGSGKVQGLRKECPNAECGAGTFMTNHFDRHYCGKCGLT 354 LAVL++YKV+ G V+ LR+ECPN CGA TFM NH DR YCG+C LT Sbjct: 24 LAVLKYYKVEDDGSVKRLRRECPN--CGASTFMANHKDRLYCGRCHLT 69 The following BLAST results are available for this feature:
BLAST of CX306342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX306342 ID=CX306342; Name=CX306342; organism=Citrus clementina; type=EST; length=497bpback to top |