CX306419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALAR (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=hemF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.383e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF+IKH FFDDLN D +F AY+PI+E+RK + ++ +++Q RRG Sbjct: 86 FEAMGVSLVVHPRNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGEDVYPRYKKWCDDYFFIKHRNEQRGIGGLFFDDLNTPDFASCFAFMQAVGKGYTEAYLPIVERRKTMAWGERERSFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PSEP1 (Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=hemF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.383e-35 Identity = 69/157 (43.95%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP PT H N R+F + G WWFGGG DLTP Y EED H+H + A F YPR+K WCD YF++KH FFDDLN++D + +F ++ I AY+PI+++RKDTP+T Q + +Q+ RRG Sbjct: 87 FEALGVSLVIHPYNPHVPTSHANVRFFIAEKE----GEEAVWWFGGGFDLTPYYGNEEDCVHWHRVAEQACAPFGADVYPRYKAWCDRYFHLKHRGEPRGIGGLFFDDLNEWDFDTCFAFIRAIGDAYINAYLPIVQRRKDTPYTPQQREFQEYRRG 239
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_LEGPH (Coproporphyrinogen-III oxidase, aerobic OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=hemF PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.383e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NP+ PT H N R+F + P WWFGGG DLTP Y F ED +H+H T +A F T YP+FK+WCDDYF+IKH FFDD N+ + + I AY PI+ +RKD PF ++ KA+Q RRG Sbjct: 94 FSALGVSLVIHPQNPYVPTTHANVRFFVAEKEDSEP----VWWFGGGFDLTPYYGFVEDCEHWHQTALNACLPFGETIYPKFKRWCDDYFFIKHRNEARGIGGLFFDDYNEISFDHSFELMRSIGDHFILAYEPIVARRKDIPFGNREKAFQNYRRG 246
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_LEGPC (Coproporphyrinogen-III oxidase, aerobic OS=Legionella pneumophila (strain Corby) GN=hemF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.383e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NP+ PT H N R+F + P WWFGGG DLTP Y F ED +H+H T +A F T YP+FK+WCDDYF+IKH FFDD N+ + + I AY PI+ +RKD PF ++ KA+Q RRG Sbjct: 94 FSALGVSLVIHPQNPYVPTTHANVRFFVAEKEDSEP----VWWFGGGFDLTPYYGFVEDCEHWHQTALNACLPFGETIYPKFKRWCDDYFFIKHRNEARGIGGLFFDDYNEISFDHSFELMRSIGDHFILAYEPIVARRKDIPFGNREKAFQNYRRG 246
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_LEGPA (Coproporphyrinogen-III oxidase, aerobic OS=Legionella pneumophila (strain Paris) GN=hemF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.383e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NP+ PT H N R+F + P WWFGGG DLTP Y F ED +H+H T +A F T YP+FK+WCDDYF+IKH FFDD N+ + + I AY PI+ +RKD PF ++ KA+Q RRG Sbjct: 94 FSALGVSLVIHPQNPYVPTTHANVRFFVAEKEDSEP----VWWFGGGFDLTPYYGFVEDCEHWHQTALNACLPFGETIYPKFKRWCDDYFFIKHRNEARGIGGLFFDDYNEISFDHSFELMRSIGDHFILAYEPIVARRKDIPFGNREKAFQNYRRG 246
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHEON (Coproporphyrinogen-III oxidase, aerobic OS=Shewanella oneidensis GN=hemF PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.112e-35 Identity = 71/157 (45.22%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HPKNP+ PT H N R+F A KD GA WWFGGG DLTP Y FEEDV+ +H + K+ F YP++KKWCD+YF++ H FFDDLN + F N + AY PI+E+RKDT + ++ + +Q RRG Sbjct: 88 FEAMGVSLVIHPKNPYIPTTHANVRFFI--AHKD--GAEPVWWFGGGFDLTPYYPFEEDVREWHQSAKNLCQPFGDDVYPKYKKWCDEYFFLPHRNETRGVGGLFFDDLNQAGFDKSFDFMQAVGNGFLTAYAPIVERRKDTDYGERERDFQLYRRG 240
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALSV (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella schwarzengrund (strain CVM19633) GN=hemF PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.112e-35 Identity = 70/157 (44.59%), Postives = 91/157 (57.96%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + +F N +AY+PI+E+RK + ++ + +Q RRG Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGVGGLFFDDLNTPDFDHCFAFMQAVGNGYTQAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PSEPG (Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas putida (strain GB-1) GN=hemF PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.112e-35 Identity = 68/157 (43.31%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP NP PT H N R+F + G WWFGGG DLTP Y EED H+H + A F YPR+K WCD YF++KH FFDDLN++D + +F ++ + AY+PI+++RKDTP+T Q + +Q+ RRG Sbjct: 87 FEALGVSLVIHPHNPHVPTSHANVRFFIAEKE----GEEAVWWFGGGFDLTPYYGNEEDCIHWHRVAEQACAPFGADVYPRYKAWCDRYFHLKHRGEPRGIGGLFFDDLNEWDFDTCFAFIRAIGDAYVNAYLPIVQRRKDTPYTPQQREFQEYRRG 239
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_LEGPL (Coproporphyrinogen-III oxidase, aerobic OS=Legionella pneumophila (strain Lens) GN=hemF PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.112e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S V+HP+NP+ PT H N R+F + P WWFGGG DLTP Y F ED +H+H T +A F T YP+FK+WCDDYF+IKH FFDD N+ + + I AY PI+ +RKD PF ++ KA+Q RRG Sbjct: 94 FSALGVSLVIHPQNPYVPTTHANVRFFVAEKEDSEP----VWWFGGGFDLTPYYGFIEDCEHWHQTALNACLPFGETIYPKFKRWCDDYFFIKHRNEARGIGGLFFDDYNEISFDHSFELMRSIGDHFILAYEPIVARRKDIPFGNREKAFQNYRRG 246
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_BURCC (Coproporphyrinogen-III oxidase, aerobic OS=Burkholderia cenocepacia (strain MC0-3) GN=hemF PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.112e-35 Identity = 66/157 (42.04%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557 F A G+S VLHP+NP+ PT+H N R P + P +WFGGG DLTP Y FE+D +HFH T K A D F YPRFK+WCD+YF++KH FFDD ++ E ++ + AY+PI+E+R + P+ ++ + +Q RRG Sbjct: 93 FEALGVSLVLHPRNPYCPTVHMNVRMLIATKPGEAP----VFWFGGGMDLTPVYGFEDDARHFHQTCKDALDPFGAELYPRFKQWCDEYFFLKHRNETRGIGGIFFDDFSEPGFERSFDLMQSVGDAFLHAYLPIVERRAELPYGERERDFQAYRRG 245 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |