CX306419
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALTI (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella typhi GN=hemF PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.064e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + +F N AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGYTEAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALPK (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella paratyphi A (strain AKU_12601) GN=hemF PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.064e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + +F N AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGYTEAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALPA (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella paratyphi A GN=hemF PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.064e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + +F N AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGYTEAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALNS (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella newport (strain SL254) GN=hemF PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.064e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + +F N AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGYTEAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALG2 (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=hemF PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.064e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + +F N AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGYTEAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALDC (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella dublin (strain CT_02021853) GN=hemF PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.064e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + +F N AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGYTEAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SALA4 (Coproporphyrinogen-III oxidase, aerobic OS=Salmonella agona (strain SL483) GN=hemF PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.064e-35 Identity = 70/157 (44.59%), Postives = 90/157 (57.32%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYF++KH FFDDLN D + +F N AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYIPTSHANVRFFIAEKP----GADPVWWFGGGFDLTPYYGFEEDAVHWHRTARDLCQPFGDDVYPRYKKWCDDYFFLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGNGYTEAYLPIVERRKAMVWGERERNFQLYRRG 238
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PSEU5 (Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas stutzeri (strain A1501) GN=hemF PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.064e-35 Identity = 68/157 (43.31%), Postives = 94/157 (59.87%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + + P WWFGGG DLTP Y EED H+H + A F YPR+K+WCD YF+IKH FFDDLN +D + +F ++ ++AY+PI+++RK TPF ++ + +Q LRRG
Sbjct: 87 FEALGVSLVIHPHNPYVPTSHANVRFFIAEKDGEEP----VWWFGGGFDLTPYYGAEEDCVHWHRVARDACAPFGAEVYPRYKEWCDRYFHIKHRNEPRGVGGLFFDDLNQWDFDTSFAFMRAVGDAYLQAYLPIVQRRKATPFGERERQFQLLRRG 239
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_PSEMY (Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas mendocina (strain ymp) GN=hemF PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.064e-35 Identity = 67/157 (42.68%), Postives = 94/157 (59.87%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP+NP+ PT H N R+F + + P WWFGGG DLTP Y EED +++H A F YPRFK WCD YF++KH FFDDLN++D + +F ++ I+AY+PI+++RK TPF ++ + +Q RRG
Sbjct: 87 FQALGVSLVIHPENPYVPTSHANVRFFSAEKEGEEP----VWWFGGGFDLTPYYANEEDCRYWHQVAFDACAPFGAEVYPRFKAWCDRYFHLKHRGEPRGIGGLFFDDLNEWDFDTCFAFMRAIGDAYIQAYLPIVQRRKLTPFGEREREFQAFRRG 239
BLAST of CX306419 vs. ExPASy Swiss-Prot
Match: HEM6_SHIFL (Coproporphyrinogen-III oxidase, aerobic OS=Shigella flexneri GN=hemF PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.308e-35 Identity = 70/157 (44.59%), Postives = 89/157 (56.69%), Query Frame = 3
Query: 87 FFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSARDKFDPTFYPRFKKWCDDYFYIKHXXXXXXXXXXFFDDLNDYDQEMLLSFATECANSVIRAYIPIIEKRKDTPFTDQHKAWQQLRRG 557
F A G+S V+HP NP+ PT H N R+F + P GA WWFGGG DLTP Y FEED H+H T + F YPR+KKWCDDYFY+KH FFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 86 FEAMGVSLVVHPHNPYVPTSHANVRFFIAEKP----GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCQPFGEDVYPRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238 The following BLAST results are available for this feature:
BLAST of CX306419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306419 ID=CX306419; Name=CX306419; organism=Citrus clementina; type=EST; length=558bpback to top |