CX307764
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307764 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.518e-35 Identity = 65/130 (50.00%), Postives = 91/130 (70.00%), Query Frame = 2 Query: 2 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEGVPLVAFSLKDN 391 F+ P++ WDFRL V SIN SGHKYGLVY GIGWV+W+++ LPEELIF ++YLG + PT +NFS+ +S +I QYY +R GFEGYR + + + A L +E+TG F+I + +P+V + LKD+ Sbjct: 252 FVEPDIIWDFRLKNVISINTSGHKYGLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYGFEGYRTIHQKTSDVAQYLAHAVEQTGYFDIYNDGSHLPIVCYKLKDD 381
BLAST of CX307764 vs. ExPASy Swiss-Prot
Match: DCEB_SHIFL (Glutamate decarboxylase beta OS=Shigella flexneri GN=gadB PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.088e-33 Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 2 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK 394 F+ P++ WDFRLP VKSI+ SGHK+GL G GWV+WR++E LP+EL+F+++YLG TF +NFS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + Sbjct: 253 FVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE 386
BLAST of CX307764 vs. ExPASy Swiss-Prot
Match: DCEB_ECOLI (Glutamate decarboxylase beta OS=Escherichia coli (strain K12) GN=gadB PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.088e-33 Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 2 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK 394 F+ P++ WDFRLP VKSI+ SGHK+GL G GWV+WR++E LP+EL+F+++YLG TF +NFS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + Sbjct: 253 FVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE 386
BLAST of CX307764 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 1.088e-33 Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 2 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK 394 F+ P++ WDFRLP VKSI+ SGHK+GL G GWV+WR++E LP+EL+F+++YLG TF +NFS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + Sbjct: 253 FVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE 386
BLAST of CX307764 vs. ExPASy Swiss-Prot
Match: DCEB_ECO57 (Glutamate decarboxylase beta OS=Escherichia coli O157:H7 GN=gadB PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.088e-33 Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 2 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK 394 F+ P++ WDFRLP VKSI+ SGHK+GL G GWV+WR++E LP+EL+F+++YLG TF +NFS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + Sbjct: 253 FVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE 386
BLAST of CX307764 vs. ExPASy Swiss-Prot
Match: DCEA_SHIFL (Glutamate decarboxylase alpha OS=Shigella flexneri GN=gadA PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 1.088e-33 Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 2 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK 394 F+ P++ WDFRLP VKSI+ SGHK+GL G GWV+WR++E LP+EL+F+++YLG TF +NFS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + Sbjct: 253 FVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKQGPYEFICTGRPDEGIPAVCFKLKDGE 386
BLAST of CX307764 vs. ExPASy Swiss-Prot
Match: DCEA_ECOLI (Glutamate decarboxylase alpha OS=Escherichia coli (strain K12) GN=gadA PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.088e-33 Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 2 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK 394 F+ P++ WDFRLP VKSI+ SGHK+GL G GWV+WR++E LP+EL+F+++YLG TF +NFS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + Sbjct: 253 FVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE 386
BLAST of CX307764 vs. ExPASy Swiss-Prot
Match: DCEA_ECOL6 (Glutamate decarboxylase alpha OS=Escherichia coli O6 GN=gadA PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.088e-33 Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 2 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK 394 F+ P++ WDFRLP VKSI+ SGHK+GL G GWV+WR++E LP+EL+F+++YLG TF +NFS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LKD + Sbjct: 253 FVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE 386
BLAST of CX307764 vs. ExPASy Swiss-Prot
Match: DCEA_ECO57 (Glutamate decarboxylase alpha OS=Escherichia coli O157:H7 GN=gadA PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.166e-33 Identity = 64/134 (47.76%), Postives = 91/134 (67.91%), Query Frame = 2 Query: 2 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIV---SKDEGVPLVAFSLKDNK 394 F+ P++ WDFRLP VKSI+ SGHK+GL G GWV+WR++E LP+EL+F+++YLG TF +NFS+ + QVIAQYY+ +RLG EGY V ++ A L + + K G + + DEG+P V F LK+ + Sbjct: 253 FVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKEGE 386
BLAST of CX307764 vs. ExPASy Swiss-Prot
Match: GADA_DICDI (Glutamate decarboxylase A OS=Dictyostelium discoideum GN=gadA PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.269e-31 Identity = 62/133 (46.62%), Postives = 89/133 (66.92%), Query Frame = 2 Query: 2 FLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEKTGRFNIVSKDEG-VPLVAFSLKDNKR 397 FL PE+ WDFRLP VKSIN SGHK+GL G+GWVVWR K D+ ++L+F +NYLG + PTF+LNFS+ Q++ QYY +R G GY V + C ++ + + + ++K G F+IV G +P + LK + + Sbjct: 251 FLQPEIVWDFRLPRVKSINGSGHKFGLSPLGVGWVVWRGKNDIHKDLVFDVNYLGGNMPTFSLNFSRPGGQIVCQYYNFLRHGRSGYTAVHQACLDHGIFISKQVKKHGIFDIVYDGTGALPGACWKLKKDAK 383 The following BLAST results are available for this feature:
BLAST of CX307764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307764 ID=CX307764; Name=CX307764; organism=Citrus clementina; type=EST; length=404bpback to top |