CX307793

Overview
NameCX307793
Unique NameCX307793
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307793 vs. ExPASy Swiss-Prot
Match: VATA_PLAF7 (V-type proton ATPase catalytic subunit A OS=Plasmodium falciparum (isolate 3D7) GN=vapA PE=3 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.045e-65
Identity = 119/168 (70.83%), Postives = 139/168 (82.74%), Query Frame = 1
Query:    1 VTYIAPAGQYSLKDTVLELEFQGVKKSFTMLQAWPVRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGY 504
            +TYIAP G Y+LKD + ELE+QG K ++ +   WPVR PRPV  K+  DT LLTGQRVLD+LFP+V GGTCAIPGAFGCGKT +SQALSKYSNS+ ++YVGCGERGNEMAE+L DFP+LT T  D  +  +M+RT LVANTSNMPVAAREASIYTGIT+ EYFRDMGY
Sbjct:  170 LTYIAPDGSYTLKDKIFELEYQGKKYTYGLSHLWPVRDPRPVLEKVTGDTLLLTGQRVLDSLFPTVQGGTCAIPGAFGCGKTCVSQALSKYSNSEVIIYVGCGERGNEMAEILSDFPELT-TKVDNEDVGIMQRTCLVANTSNMPVAAREASIYTGITLCEYFRDMGY 336          
BLAST of CX307793 vs. ExPASy Swiss-Prot
Match: VATA_NEUCR (V-type proton ATPase catalytic subunit A OS=Neurospora crassa GN=vma-1 PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 6.773e-65
Identity = 117/167 (70.06%), Postives = 142/167 (85.03%), Query Frame = 1
Query:    1 VTYIAPAGQYSLKDTVLELEFQGVKKSFTMLQAWPVRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMG 501
            +T IA  G+Y++++ +LE+EF G K  + M+Q WPVR PRP + K +A+ P L GQRVLDALFPSV GGT AIPGAFGCGKTVISQ++SK+SNSD +VYVGCGERGNEMAEVL DFP+L++ + DGR+E +MKRTTL+ANTSNMPVAAREASIYTGIT+AEYFRD G
Sbjct:  172 ITRIAEKGEYTVEEKILEVEFDGKKTEYPMMQTWPVRVPRPAAEKHSANQPFLVGQRVLDALFPSVQGGTVAIPGAFGCGKTVISQSVSKFSNSDVIVYVGCGERGNEMAEVLKDFPELSIEV-DGRKEPIMKRTTLIANTSNMPVAAREASIYTGITVAEYFRDQG 337          
BLAST of CX307793 vs. ExPASy Swiss-Prot
Match: VATA_DICDI (V-type proton ATPase catalytic subunit A OS=Dictyostelium discoideum GN=vatA PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 7.488e-64
Identity = 119/167 (71.26%), Postives = 139/167 (83.23%), Query Frame = 1
Query:    1 VTYIAPAGQYSLKDTVLELEFQGVKKSFTMLQAWPVRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMG 501
            +  IAPAG+Y+L   +L +EF G +K  TM+  WPVR+ RPV  KL  + PLLTGQRVLD+LFP V GGTCAIPGAFGCGKTVISQ+LSK+SNSD +VYVGCGERGNEMAEVLM+FP+L   + D +EE +M+RT LVANTSNMPVAAREASIYTGIT+AEYFRDMG
Sbjct:  177 IVEIAPAGEYTLDHALLTIEFDGKRKQLTMVHNWPVRSARPVIEKLPCNYPLLTGQRVLDSLFPCVQGGTCAIPGAFGCGKTVISQSLSKFSNSDAIVYVGCGERGNEMAEVLMEFPELHTKVGD-KEEPIMQRTCLVANTSNMPVAAREASIYTGITLAEYFRDMG 342          
BLAST of CX307793 vs. ExPASy Swiss-Prot
Match: VATA_ENCCU (V-type proton ATPase catalytic subunit A OS=Encephalitozoon cuniculi GN=VMA1 PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 1.726e-60
Identity = 115/167 (68.86%), Postives = 133/167 (79.64%), Query Frame = 1
Query:    1 VTYIAPAGQYSLKDTVLELEFQGVKKSFTMLQAWPVRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMG 501
            V +IA  G Y+LKD V+ELE    K+   M   WPVR PRP+  K  A  PL TGQR+LD+LFP V GGT AIPGAFGCGKTVISQ+LSKYSNSD +VYVGCGERGNEM+EVLM+FP+LT+    G+++S+MKRT LVANTSNMPVAAREASIYTGITI+EY RD G
Sbjct:  177 VAFIACRGNYTLKDVVMELETGKGKEEMFMYHTWPVRIPRPIEEKKNATHPLFTGQRILDSLFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDAIVYVGCGERGNEMSEVLMEFPKLTV---GGKDDSIMKRTVLVANTSNMPVAAREASIYTGITISEYLRDQG 340          
BLAST of CX307793 vs. ExPASy Swiss-Prot
Match: VATA_DEIGD (V-type ATP synthase alpha chain OS=Deinococcus geothermalis (strain DSM 11300) GN=atpA PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.465e-51
Identity = 100/168 (59.52%), Postives = 124/168 (73.81%), Query Frame = 1
Query:    1 VTYIAPAGQYSLKDTVLELEFQGVKKSFTMLQAWPVRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGY 504
            +T++APAG+Y++ DT+  LE  G   +  +   WPVR PRPV+ KL    P LTG R+LD LFP V+GGT AIPG FG GKTV  Q+++KY N+D VVYVGCGERGNEM +VL++FP+L      G    +M RT L+ANTSNMPVAAREAS+YTGIT+AEYFRD GY
Sbjct:  160 LTWVAPAGEYTIDDTIATLE-DGT--NLRLAHYWPVRAPRPVAQKLDPSQPFLTGMRILDVLFPLVMGGTAAIPGPFGSGKTVTQQSVAKYGNADIVVYVGCGERGNEMTDVLVEFPELEDPKTGG---PLMHRTILIANTSNMPVAAREASVYTGITLAEYFRDQGY 321          
BLAST of CX307793 vs. ExPASy Swiss-Prot
Match: VATA_DEIRA (V-type ATP synthase alpha chain OS=Deinococcus radiodurans GN=atpA PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 4.262e-51
Identity = 99/165 (60.00%), Postives = 120/165 (72.73%), Query Frame = 1
Query:   10 IAPAGQYSLKDTVLELEFQGVKKSFTMLQAWPVRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGY 504
            +APAGQY++ DT+ ELE  G K    +   WPVR PRPV  KL    P LTG R+LD +FP V+GG  AIPG FG GKTV  Q+++KY N+D VVYVGCGERGNEM +VL++FP+L      G    +M RT L+ANTSNMPVAAREAS+YTG+T+AEYFRD GY
Sbjct:  163 VAPAGQYTIDDTIAELE-DGTK--LRLAHYWPVRAPRPVQKKLDPSLPFLTGMRILDVMFPLVMGGAAAIPGPFGSGKTVTQQSVAKYGNADIVVYVGCGERGNEMTDVLVEFPELEDPKTGG---PLMHRTILIANTSNMPVAAREASVYTGVTLAEYFRDQGY 321          
BLAST of CX307793 vs. ExPASy Swiss-Prot
Match: VATA3_METHJ (V-type ATP synthase alpha chain 3 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA3 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 4.262e-51
Identity = 99/169 (58.58%), Postives = 123/169 (72.78%), Query Frame = 1
Query:    1 VTYIAPAGQYSLKDTVLELEFQGVKKSFTMLQAWPVRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGRE-ESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGY 504
            + +IA  G+Y + DT++ L+    KK  TM+Q WPVR PRPV  +L    PLLTGQR++D LFP   GGT AIPG FG GKTV+ Q L+K+ N+D ++Y+GCGERGNEMA+VL  FP    TL D R   ++  R  L+ANTSNMPVAAREAS+YTGITIAEY+RDMGY
Sbjct:  160 IHFIAEQGEYVITDTIVILDTGEEKKELTMIQRWPVRDPRPVRERLDPVEPLLTGQRIIDTLFPLARGGTAAIPGPFGSGKTVVQQQLAKWVNADIIIYIGCGERGNEMADVLEQFP----TLKDPRTGHALSSRMVLIANTSNMPVAAREASVYTGITIAEYYRDMGY 324          
BLAST of CX307793 vs. ExPASy Swiss-Prot
Match: VATA_DEIDV (V-type ATP synthase alpha chain OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=atpA PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.620e-50
Identity = 99/166 (59.64%), Postives = 120/166 (72.29%), Query Frame = 1
Query:    7 YIAPAGQYSLKDTVLELEFQGVKKSFTMLQAWPVRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGY 504
            ++A AG+Y++ DT+ ELE  G K    +   WPVR PRPV  KL    P LTG R+LD LFP V+GG  AIPG FG GKTV  Q+++KY N+D VVYVGCGERGNEM +VL++FP+L      G    +M RT L+ANTSNMPVAAREAS+YTGIT+AEYFRD GY
Sbjct:  162 WVAAAGEYTIDDTIAELE-DGTK--LRLAHYWPVRAPRPVQKKLDPSLPFLTGMRILDVLFPLVMGGAAAIPGPFGSGKTVTQQSVAKYGNADIVVYVGCGERGNEMTDVLVEFPELVDPKTGG---PLMHRTILIANTSNMPVAAREASVYTGITLAEYFRDQGY 321          
BLAST of CX307793 vs. ExPASy Swiss-Prot
Match: VATA2_CLOTE (V-type ATP synthase alpha chain 2 OS=Clostridium tetani GN=atpA2 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.371e-49
Identity = 93/168 (55.36%), Postives = 123/168 (73.21%), Query Frame = 1
Query:    1 VTYIAPAGQYSLKDTVLELEFQGVKKSFTMLQAWPVRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGY 504
            VT +  +G+Y++++ ++ ++  G      + Q WPVRTPRP+ ++L+   PL+TGQR+LD  FP   GGT AIPG FG GKT+    L+K+S++D +VY+GCGERGNEM EVL DFP+L   +      S+M RT L+ANTSNMPVAAREASIYTGITIAEY+RDMGY
Sbjct:  163 VTKVKESGKYNIEEKIVTVKDGGNIYELNLYQRWPVRTPRPIKNRLSLGKPLITGQRILDMFFPIAKGGTVAIPGGFGTGKTMTQHQLAKWSDADIIVYIGCGERGNEMTEVLEDFPKL---IDPKTNTSLMNRTVLIANTSNMPVAAREASIYTGITIAEYYRDMGY 327          
BLAST of CX307793 vs. ExPASy Swiss-Prot
Match: VATA_THET8 (V-type ATP synthase alpha chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=atpA PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 2.339e-49
Identity = 99/168 (58.93%), Postives = 122/168 (72.62%), Query Frame = 1
Query:    1 VTYIAPAGQYSLKDTVLELEFQGVKKSFTMLQAWPVRTPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGY 504
            V  + PAG+Y++++ V+ LE  G +    M   WPVR  RPV  KL  +TP LTG R+LD LFP  +GGT AIPG FG GKTV  Q+L+K+SN+D VVYVGCGERGNEM +VL++FP+LT     G    +M RT L+ANTSNMPVAAREASIY G+TIAEYFRD G+
Sbjct:  157 VKEVKPAGEYTVEEPVVVLE-DGTE--LKMYHTWPVRRARPVQRKLDPNTPFLTGMRILDVLFPVAMGGTAAIPGPFGSGKTVTQQSLAKWSNADVVVYVGCGERGNEMTDVLVEFPELTDPKTGG---PLMHRTVLIANTSNMPVAAREASIYVGVTIAEYFRDQGF 318          
The following BLAST results are available for this feature:
BLAST of CX307793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
VATA_PLAF71.045e-6570.83V-type proton ATPase catalytic subunit A OS=Plasmo... [more]
VATA_NEUCR6.773e-6570.06V-type proton ATPase catalytic subunit A OS=Neuros... [more]
VATA_DICDI7.488e-6471.26V-type proton ATPase catalytic subunit A OS=Dictyo... [more]
VATA_ENCCU1.726e-6068.86V-type proton ATPase catalytic subunit A OS=Enceph... [more]
VATA_DEIGD1.465e-5159.52V-type ATP synthase alpha chain OS=Deinococcus geo... [more]
VATA_DEIRA4.262e-5160.00V-type ATP synthase alpha chain OS=Deinococcus rad... [more]
VATA3_METHJ4.262e-5158.58V-type ATP synthase alpha chain 3 OS=Methanospiril... [more]
VATA_DEIDV1.620e-5059.64V-type ATP synthase alpha chain OS=Deinococcus des... [more]
VATA2_CLOTE1.371e-4955.36V-type ATP synthase alpha chain 2 OS=Clostridium t... [more]
VATA_THET82.339e-4958.93V-type ATP synthase alpha chain OS=Thermus thermop... [more]

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Properties
Property NameValue
Genbank descriptionC20002A04SK OF2 Citrus clementina cDNA clone C20002A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307793 ID=CX307793; Name=CX307793; organism=Citrus clementina; type=EST; length=505bp
GTCACATACATTGCACCTGCTGGTCAATATTCTCTAAAGGATACTGTGTT
AGAGCTTGAGTTTCAAGGTGTCAAAAAGAGCTTTACTATGCTTCAAGCTT
GGCCTGTACGTACCCCAAGGCCTGTTTCATCAAAGCTTGCTGCTGATACT
CCACTGCTTACAGGACAGCGTGTTCTTGATGCCCTTTTCCCTTCAGTTCT
TGGTGGGACTTGTGCTATTCCTGGAGCATTTGGTTGTGGCAAAACTGTTA
TTAGTCAAGCTCTCTCTAAGTACTCCAATTCTGATACTGTTGTTTATGTT
GGTTGTGGGGAGCGAGGAAATGAAATGGCAGAGGTGCTTATGGATTTTCC
TCAATTGACAATGACATTGCCTGATGGCCGTGAAGAATCTGTCATGAAGC
GTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGGCTGCTCGTGAG
GCTTCGATTTATACAGGAATCACCATAGCTGAATATTTCAGAGATATGGG
GTACA
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