CX307825

Overview
NameCX307825
Unique NameCX307825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length464
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_PROMH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Proteus mirabilis (strain HI4320) GN=metE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.188e-26
Identity = 67/157 (42.68%), Postives = 88/157 (56.05%), Query Frame = 2 
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKAL---AGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H+ +DL  E KLDDE+KSW AFA QK  EV  LAKAL    G+ DE     +A  +  R+ S RV N +V     A+   D  R +    R   Q+ + N P+ PTTTIGSFPQT E+R VR ++K  +I    Y  +I E I + +  QE L +DV
Sbjct:  327 HSPIDLSAETKLDDEVKSWFAFAVQKCAEVALLAKALNAPEGEYDEQLAQYSAPIR-QREHSSRVHNAKVAARLQAINAQDGERTSPYQQRAKVQRARFNFPLWPTTTIGSFPQTTEIRTVRLDFKKGRIDTTAYRTNISEHIKQAIDEQERLGLDV 482
[Close]
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_BURMS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain SAVP1) GN=metE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.188e-26
Identity = 66/156 (42.31%), Postives = 94/156 (60.26%), Query Frame = 2 
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H  VDL +E +LD+E+K+WLAFAAQK  EV AL  AL   +      F   A   A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP+LPTTTIGSFPQT E+RR R  +K   +    Y+ +++E++   +  Q    +DV
Sbjct:  328 HVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAVVAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYGLDV 483
[Close]
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_BURMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei GN=metE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.188e-26
Identity = 66/156 (42.31%), Postives = 94/156 (60.26%), Query Frame = 2 
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H  VDL +E +LD+E+K+WLAFAAQK  EV AL  AL   +      F   A   A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP+LPTTTIGSFPQT E+RR R  +K   +    Y+ +++E++   +  Q    +DV
Sbjct:  328 HVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAVVAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYGLDV 483
[Close]
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_BURM9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain NCTC 10229) GN=metE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.188e-26
Identity = 66/156 (42.31%), Postives = 94/156 (60.26%), Query Frame = 2 
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H  VDL +E +LD+E+K+WLAFAAQK  EV AL  AL   +      F   A   A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP+LPTTTIGSFPQT E+RR R  +K   +    Y+ +++E++   +  Q    +DV
Sbjct:  328 HVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAVVAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYGLDV 483
[Close]
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_BURM7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain NCTC 10247) GN=metE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.188e-26
Identity = 66/156 (42.31%), Postives = 94/156 (60.26%), Query Frame = 2 
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H  VDL +E +LD+E+K+WLAFAAQK  EV AL  AL   +      F   A   A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP+LPTTTIGSFPQT E+RR R  +K   +    Y+ +++E++   +  Q    +DV
Sbjct:  328 HVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAVVAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQVRIAIDKQLAYGLDV 483
[Close]
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_YERPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis (strain Pestoides F) GN=metE PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.858e-26
Identity = 64/156 (41.03%), Postives = 90/156 (57.69%), Query Frame = 2 
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I   +  QE L +DV
Sbjct:  327 HSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERLGLDV 482
[Close]
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_YERPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metE PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.858e-26
Identity = 64/156 (41.03%), Postives = 90/156 (57.69%), Query Frame = 2 
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I   +  QE L +DV
Sbjct:  327 HSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERLGLDV 482
[Close]
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_YERPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis GN=metE PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.858e-26
Identity = 64/156 (41.03%), Postives = 90/156 (57.69%), Query Frame = 2 
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I   +  QE L +DV
Sbjct:  327 HSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERLGLDV 482
[Close]
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_YERPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metE PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.858e-26
Identity = 64/156 (41.03%), Postives = 90/156 (57.69%), Query Frame = 2 
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            H+ +DL  E +LD E+KSW AFA QK  E+  L +AL    D      +A +A   +R+SS RV N +V++  AA+   D  R     AR + Q+K+ NLP  PTTTIGSFPQT E+R +R ++K  ++  + Y   I E I   +  QE L +DV
Sbjct:  327 HSPIDLNEETRLDAEVKSWFAFALQKCAELALLTQALNAPNDAKLAELAAYSAPIRARRSSSRVHNAQVEQRLAAITSQDIERQLPYEARAETQRKRFNLPAWPTTTIGSFPQTTEIRGLRLDFKQGRLDGKNYRTGISEHIKHAIAEQERLGLDV 482
[Close]
BLAST of CX307825 vs. ExPASy Swiss-Prot
Match: METE_CANAL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Candida albicans GN=MET6 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 3.732e-26
Identity = 65/154 (42.21%), Postives = 91/154 (59.09%), Query Frame = 2 
Query:    2 HTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVKLQEELDIDV 463
            HT VDL +E KLD  IK W +FA QK+ EV  +AK ++G+       ANAA+  +R  S    + +VQ+    +  +   R      RL  Q+ K NLP+ PTTTIGSFPQT ++R  R ++   +I+ EEY A I +EI  VV+ QEE+ +DV
Sbjct:  341 HTPVDLESETKLDAVIKDWFSFATQKLDEVVVIAKNVSGEDVSKQLEANAASIKARSESSITNDPKVQERLTTINEALATRKAAFPERLTEQKAKYNLPLFPTTTIGSFPQTKDIRINRNKFAKGQITAEEYEAFINKEIETVVRFQEEIGLDV 494
The following BLAST results are available for this feature:
BLAST of CX307825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
METE_PROMH2.188e-2642.685-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURMS2.188e-2642.315-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURMA2.188e-2642.315-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURM92.188e-2642.315-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURM72.188e-2642.315-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPP2.858e-2641.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPN2.858e-2641.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPE2.858e-2641.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YERPA2.858e-2641.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CANAL3.732e-2642.215-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC20002D08SK OF2 Citrus clementina cDNA clone C20002D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307825 ID=CX307825; Name=CX307825; organism=Citrus clementina; type=EST; length=464bp
TCACACTGCTGTTGATCTTGTTAATGAGAACAAACTCGACGATGAAATCA
AGTCATGGCTGGCATTTGCTGCCCAGAAAGTTGTTGAAGTGAATGCATTG
GCCAAGGCTTTGGCTGGCCAAAAGGATGAGGGATTCTTCTCTGCCAATGC
TGCAGCTCAGGCTTCAAGAAAGTCCTCCCCGAGAGTGACCAATGAGAGAG
TTCAAAAGGCTGCTGCTGCTTTGAAGGGATCAGACCACAGACGTGCTACA
AACGTTAGTGCTAGATTGGATGCTCAACAGAAGAAGCTCAATCTTCCAAT
CCTCCCAACCACCACAATTGGATCCTTCCCACAAACCATTGAACTTAGGA
GAGTCCGCCGTGAATACAAGGCTAAGAAGATTTCTGAGGAAGAATATGTT
GCTTCCATCAAGGAGGAAATCAACAAGGTTGTCAAACTCCAAGAAGAGCT
TGATATTGATGTCC
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