CX307840

Overview
NameCX307840
Unique NameCX307840
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length393
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_BURM7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain NCTC 10247) GN=metE PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.884e-38
Identity = 79/122 (64.75%), Postives = 92/122 (75.41%), Query Frame = 3
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 368
            VT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F
Sbjct:  560 VTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF 681          
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_ERWT9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metE PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.460e-38
Identity = 80/124 (64.52%), Postives = 91/124 (73.39%), Query Frame = 3
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 374
            VTIL WSF R D  R     QIALA++DEVEDLEKAGI +IQIDE ALREGLPL +S+   YL+WAV +FR+     QD TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E
Sbjct:  557 VTILCWSFPREDVSRETIAKQIALALRDEVEDLEKAGIGIIQIDEPALREGLPLHQSDWGAYLEWAVDAFRLNAAVAQDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE 680          
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_PSEMY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas mendocina (strain ymp) GN=metE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.213e-38
Identity = 79/122 (64.75%), Postives = 90/122 (73.77%), Query Frame = 3
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 368
            VT+L WSF R D  R     Q+ALAI+DEV DLE AGI +IQIDEAA REGLPLR++    YLDWA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F
Sbjct:  568 VTMLMWSFPREDVSREVQARQLALAIRDEVVDLEAAGIRIIQIDEAAFREGLPLRQAAWQGYLDWATEAFRLAASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF 689          
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_BACCN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=metE PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.213e-38
Identity = 72/124 (58.06%), Postives = 93/124 (75.00%), Query Frame = 3
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 374
            VTILNWSFVRND PR E CYQIALA++ E+E LE +GI +IQ+DE ALREG+PL++ +   Y++WAV SFR+    V + TQIHTHMCYSNF DI+ +I  +DADVI+IE SRS  + +    +
Sbjct:  560 VTILNWSFVRNDLPRKEVCYQIALALRHEIERLESSGIRIIQVDEPALREGMPLKEKDWDSYIEWAVQSFRLATASVANETQIHTHMCYSNFEDIVDAIRALDADVISIETSRSHGEFIHTLEQ 683          
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_PSEAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa GN=metE PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.196e-38
Identity = 77/124 (62.10%), Postives = 91/124 (73.39%), Query Frame = 3
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 374
            VT+L WSF R D  R     Q+ALAI+DEV DLE AGI ++QIDEAA REGLPLR++    YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F +
Sbjct:  565 VTMLMWSFPREDVSREVQARQLALAIRDEVVDLEAAGIRIVQIDEAAFREGLPLRRNAWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAFEQ 688          
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_PSEAB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=metE PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.196e-38
Identity = 77/124 (62.10%), Postives = 91/124 (73.39%), Query Frame = 3
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 374
            VT+L WSF R D  R     Q+ALAI+DEV DLE AGI ++QIDEAA REGLPLR++    YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F +
Sbjct:  565 VTMLMWSFPREDVSREVQARQLALAIRDEVVDLEAAGIRIVQIDEAAFREGLPLRRNAWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAFEQ 688          
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_PSEA8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=metE PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.196e-38
Identity = 77/124 (62.10%), Postives = 91/124 (73.39%), Query Frame = 3
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 374
            VT+L WSF R D  R     Q+ALAI+DEV DLE AGI ++QIDEAA REGLPLR++    YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F +
Sbjct:  565 VTMLMWSFPREDVSREVQARQLALAIRDEVVDLEAAGIRIVQIDEAAFREGLPLRRNAWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAFEQ 688          
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_LACPL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactobacillus plantarum GN=metE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.157e-38
Identity = 76/124 (61.29%), Postives = 99/124 (79.84%), Query Frame = 3
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 374
            +TI+NWSFVR+D PR +   QIALA++ EV++LEKAGI +IQ+DE ALREGLPL++     YLD AV+SF+IT  GVQ+ TQIHTHMCYSNF DII++I  +DADVI+IE SRS  +++S F +
Sbjct:  565 LTIINWSFVRDDIPRAQVQNQIALALRQEVQNLEKAGIKIIQVDEPALREGLPLKQRHWQAYLDEAVYSFKITTTGVQNDTQIHTHMCYSNFADIINTIKALDADVISIETSRSHGEIISAFEQ 688          
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_AERS4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Aeromonas salmonicida (strain A449) GN=metE PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.157e-38
Identity = 77/122 (63.11%), Postives = 92/122 (75.41%), Query Frame = 3
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 368
            VTIL WSF R D  R ++  QI LAI+DEV DLE AGI +IQIDE A+REGLPLRK +H  YLDWAV +FR++   V D+TQIHTHMCYS+FN II ++  +DADVITIE SRS  +LL  F
Sbjct:  555 VTILCWSFPREDVSREQSALQIGLAIRDEVADLEAAGIKIIQIDEPAIREGLPLRKQDHQAYLDWAVRAFRLSASPVVDSTQIHTHMCYSDFNLIIEAVAALDADVITIETSRSQMQLLEAF 676          
BLAST of CX307840 vs. ExPASy Swiss-Prot
Match: METE_VIBPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio parahaemolyticus GN=metE PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.348e-38
Identity = 74/124 (59.68%), Postives = 94/124 (75.81%), Query Frame = 3
Query:    3 VTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 374
            VTIL W+F R D  R E   Q+ALA++DEV DL+ AGIN+IQIDE A+REGLPL+K +H  YL+WAV++F+I+    +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F E
Sbjct:  561 VTILCWTFPREDITRQEIAQQLALALRDEVSDLQDAGINIIQIDEPAIREGLPLKKRDHKAYLEWAVNAFKISAASAKPETQIHTHMCYSEFNEIIDSVAALDADVITIETSRSNMELLKAFEE 684          
The following BLAST results are available for this feature:
BLAST of CX307840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_BURM71.884e-3864.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ERWT92.460e-3864.525-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEMY3.213e-3864.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACCN3.213e-3858.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEAE4.196e-3862.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEAB4.196e-3862.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA84.196e-3862.105-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACPL7.157e-3861.295-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_AERS47.157e-3863.115-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBPA9.348e-3859.685-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC20002F02SK OF2 Citrus clementina cDNA clone C20002F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307840 ID=CX307840; Name=CX307840; organism=Citrus clementina; type=EST; length=393bp
CTGTCACCATTCTCAACTGGTCCTTTGTCAGAAATGACCAGCCCAGACAT
GAAACCTGCTACCAGATTGCTTTGGCCATCAAGGACGAAGTCGAGGATCT
TGAGAAGGCAGGCATTAACGTTATTCAAATTGATGAGGCTGCCTTGAGGG
AAGGATTGCCTCTTAGGAAATCTGAGCATGCTTTCTACTTGGACTGGGCA
GTCCACTCCTTCAGAATCACCAACTGTGGTGTCCAGGACACTACCCAGAT
CCACACCCACATGTGCTACTCCAACTTCAACGACATTATCCACTCAATTA
TCGACATGGATGCTGATGTGATCACCATTGAGAACTCTCGTTCTGATGAG
AAGCTCCTGTCTGTCTTCCGTGAGGGAGTCAAGTATGGTGCTG
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