CX307844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.878e-48 Identity = 69/117 (58.97%), Postives = 91/117 (77.78%), Query Frame = 2 Query: 2 RTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 352 +++TI++ N +DG+ TF++AT AV G+GF+ARD+ F NTAGP+KHQAVAL V ADLS FY C M A+QDT+Y H+ RQF+ +C+I GTVDFIFGNAA V Q C+I R+P GQ+ Sbjct: 315 QSKTIVSAGLNFIDGTPTFETATFAVFGKGFMARDMGFINTAGPAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQ 431 HSP 2 Score: 62.3882 bits (150), Expect = 1.878e-48 Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540 +N +TAQGR DPNQNTGI I I +L +Q T+LGRPWK++S TVIM+S + I+ Sbjct: 431 QNTITAQGRKDPNQNTGISIHNCTIKPLDNLTDIQ----TFLGRPWKDFSTTVIMKSFMDKFIN 490
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 7.047e-48 Identity = 67/110 (60.91%), Postives = 89/110 (80.91%), Query Frame = 2 Query: 8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKP 337 +T+I+GS++ DG TT+K+ATVA+VG+ F+A++I F+NTAG KHQAVA+RV AD S FYNC YQDTLY HS+RQF+ +C I+GT+DF+FG+AAAV QNC + RKP Sbjct: 312 KTVISGSKSYKDGITTYKTATVAIVGDHFIAKNIAFENTAGAIKHQAVAIRVLADESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKP 421 HSP 2 Score: 64.6994 bits (156), Expect = 7.047e-48 Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 358 VTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 +TA GR DP ++TG V+Q I D V+ TYLGRPWKEYSRT+IM + I D + Sbjct: 429 ITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFV 488
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.658e-47 Identity = 67/116 (57.76%), Postives = 89/116 (76.72%), Query Frame = 2 Query: 8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKI 355 +T+I +R+ +DG +TF++ TV V G+G++A+DI+F N+AGP+K QAVA R G+D SAFY C+ YQDTLYVHS +QF+ C I GT+DFIFGNAA V QN ++ARKPN G KI Sbjct: 281 KTVIKANRSRIDGWSTFQTPTVGVKGKGYIAKDISFVNSAGPAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKI 396 HSP 2 Score: 65.4698 bits (158), Expect = 2.658e-47 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 361 TAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540 TAQ R +Q TGI I RI A DL V+ +F YLGRPW++YSRTVI++S I DLIH Sbjct: 399 TAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIH 458
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.001e-46 Identity = 72/113 (63.72%), Postives = 84/113 (74.34%), Query Frame = 2 Query: 8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSG 346 +TIITG ++ G +T+KSAT G+GF+ RDIT +NTAGP HQAVALR +D+S FY C + YQDTLYVHS RQFF C I GTVDFIFGNAAAVLQNC I AR P +G Sbjct: 226 KTIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNPPNG 338 HSP 2 Score: 59.3066 bits (142), Expect = 1.001e-46 Identity = 29/62 (46.77%), Postives = 40/62 (64.52%), Query Frame = 1 Query: 352 NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 N +TAQ R +PNQ TGIVI S + ++L G TYLGRPW+ Y+RTV++ + + LI Sbjct: 340 NTITAQSRFNPNQTTGIVIHNSVVKGAPGVQL--GGVKTYLGRPWRSYARTVVIGTYLDTLI 399
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.003e-46 Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 2 Query: 5 TRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349 T+T ITG+++V DG +TF + TV V G F+A++I F+NTAGP K QAVALRV AD + YNC + YQDTLYVH+ RQF+ +C I GTVDFIFGN AVLQNC + RKP Q Sbjct: 117 TKTKITGNKSVKDGPSTFHTTTVGVNGANFVAKNIGFENTAGPEKEQAVALRVSADKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQ 231 HSP 2 Score: 65.855 bits (159), Expect = 1.003e-46 Identity = 34/61 (55.74%), Postives = 39/61 (63.93%), Query Frame = 1 Query: 355 MVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 MVTAQGRT+P Q IV+Q I +D + TYLGRPWKEYSRT+IMQS I I Sbjct: 234 MVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFI 294
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.300e-46 Identity = 67/114 (58.77%), Postives = 89/114 (78.07%), Query Frame = 2 Query: 8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349 +TII+G++N DG TT+++ATVA+VG F+A++I F+NTAG KHQAVA+RV +D S F+NC YQDTLY HS+RQFF +C I+GT+DF+FG+AAAV QNC + RKP Q Sbjct: 315 KTIISGNKNYKDGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQ 428 HSP 2 Score: 63.5438 bits (153), Expect = 1.300e-46 Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 1 Query: 358 VTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 +TA GR DP ++TG V Q I D V+ + YLGRPWKEYSRT+IM + I D + Sbjct: 432 ITAHGRKDPRESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFV 491
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.210e-46 Identity = 65/114 (57.02%), Postives = 81/114 (71.05%), Query Frame = 2 Query: 8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349 +TIIT R+V G TT+ SAT G+ F+A+D+TF NTAGP + QAVA+R +DLS FY + +QDTLY+HS RQFF C I+GT+DFIFGNAA V QNC I R+P GQ Sbjct: 341 KTIITSGRSVQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQ 454 HSP 2 Score: 73.9442 bits (180), Expect = 2.210e-46 Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 352 NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 N++TAQGR DP QNTGI I SRI A SDLK V ++ TYLGRPW+ YSR IM++ I + I Sbjct: 456 NIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSI 517
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.753e-46 Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 2 Query: 8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 352 +TI+TG+++ TF +AT GEGF+A+ + F+NTAGP HQAVA+RV +D S F NC YQDTLY +++RQ++ +C+I GTVDFIFG+AAA+ QNCDI RK GQK Sbjct: 356 KTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGPEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQK 470 HSP 2 Score: 74.3294 bits (181), Expect = 3.753e-46 Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 1 Query: 349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 KN VTAQGR D Q TG VI + DLK V+ F +YLGRPWK +SRTV+M+S+I D+I Sbjct: 470 KNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVI 532
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.383e-46 Identity = 64/114 (56.14%), Postives = 84/114 (73.68%), Query Frame = 2 Query: 8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349 +T+I GSR+ G T++SATVA +G+GF+ARDITF N+AGP+ QAVALRVG+D S Y C + YQD+LY S RQF+ I GTVDFIFGN+A V Q+C++ +RK +S Q Sbjct: 287 KTVIVGSRSNRGGWNTYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQ 400 HSP 2 Score: 74.3294 bits (181), Expect = 6.383e-46 Identity = 39/64 (60.94%), Postives = 43/64 (67.19%), Query Frame = 1 Query: 349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540 +N VTAQGR+DPNQNTGI I RI GS TYLGRPWK+YSRTV+MQS I IH Sbjct: 400 QNYVTAQGRSDPNQNTGISIHNCRI---------TGSTKTYLGRPWKQYSRTVVMQSFIDGSIH 454
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.840e-45 Identity = 70/116 (60.34%), Postives = 86/116 (74.14%), Query Frame = 2 Query: 5 TRTIITGSRNVVDGST-TFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349 T+T ITGS N G T+ +ATVA+ G+ F A++I F+NTAGP HQAVALRV ADL+ FYNC + YQDTLYVHS+RQFF +C ++GTVDFIFG+ VLQNC+I RKP Q Sbjct: 318 TKTKITGSLNYYIGKVKTYLTATVAINGDNFTAKNIGFENTAGPEGHQAVALRVSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQ 433 HSP 2 Score: 61.6178 bits (148), Expect = 1.840e-45 Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 1 Query: 355 MVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537 M+TAQGR+D ++TG+V+Q I V+ YLGRPWKE+SRT+IM ++I D+I Sbjct: 436 MITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVI 496 The following BLAST results are available for this feature:
BLAST of CX307844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX307844 ID=CX307844; Name=CX307844; organism=Citrus clementina; type=EST; length=541bpback to top |