CX307844

Overview
NameCX307844
Unique NameCX307844
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length541
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.878e-48
Identity = 69/117 (58.97%), Postives = 91/117 (77.78%), Query Frame = 2
Query:    2 RTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 352
            +++TI++   N +DG+ TF++AT AV G+GF+ARD+ F NTAGP+KHQAVAL V ADLS FY C M A+QDT+Y H+ RQF+ +C+I GTVDFIFGNAA V Q C+I  R+P  GQ+
Sbjct:  315 QSKTIVSAGLNFIDGTPTFETATFAVFGKGFMARDMGFINTAGPAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQ 431          

HSP 2 Score: 62.3882 bits (150), Expect = 1.878e-48
Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 1
Query:  349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540
            +N +TAQGR DPNQNTGI I    I    +L  +Q    T+LGRPWK++S TVIM+S +   I+
Sbjct:  431 QNTITAQGRKDPNQNTGISIHNCTIKPLDNLTDIQ----TFLGRPWKDFSTTVIMKSFMDKFIN 490          
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 7.047e-48
Identity = 67/110 (60.91%), Postives = 89/110 (80.91%), Query Frame = 2
Query:    8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKP 337
            +T+I+GS++  DG TT+K+ATVA+VG+ F+A++I F+NTAG  KHQAVA+RV AD S FYNC    YQDTLY HS+RQF+ +C I+GT+DF+FG+AAAV QNC +  RKP
Sbjct:  312 KTVISGSKSYKDGITTYKTATVAIVGDHFIAKNIAFENTAGAIKHQAVAIRVLADESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKP 421          

HSP 2 Score: 64.6994 bits (156), Expect = 7.047e-48
Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 1
Query:  358 VTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537
            +TA GR DP ++TG V+Q   I    D   V+    TYLGRPWKEYSRT+IM + I D +
Sbjct:  429 ITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFV 488          
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.658e-47
Identity = 67/116 (57.76%), Postives = 89/116 (76.72%), Query Frame = 2
Query:    8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKI 355
            +T+I  +R+ +DG +TF++ TV V G+G++A+DI+F N+AGP+K QAVA R G+D SAFY C+   YQDTLYVHS +QF+  C I GT+DFIFGNAA V QN  ++ARKPN G KI
Sbjct:  281 KTVIKANRSRIDGWSTFQTPTVGVKGKGYIAKDISFVNSAGPAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKI 396          

HSP 2 Score: 65.4698 bits (158), Expect = 2.658e-47
Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query:  361 TAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540
            TAQ R   +Q TGI I   RI A  DL  V+ +F  YLGRPW++YSRTVI++S I DLIH
Sbjct:  399 TAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIH 458          
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 1.001e-46
Identity = 72/113 (63.72%), Postives = 84/113 (74.34%), Query Frame = 2
Query:    8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSG 346
            +TIITG ++   G +T+KSAT    G+GF+ RDIT +NTAGP  HQAVALR  +D+S FY C +  YQDTLYVHS RQFF  C I GTVDFIFGNAAAVLQNC I AR P +G
Sbjct:  226 KTIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNPPNG 338          

HSP 2 Score: 59.3066 bits (142), Expect = 1.001e-46
Identity = 29/62 (46.77%), Postives = 40/62 (64.52%), Query Frame = 1
Query:  352 NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537
            N +TAQ R +PNQ TGIVI  S +     ++L  G   TYLGRPW+ Y+RTV++ + +  LI
Sbjct:  340 NTITAQSRFNPNQTTGIVIHNSVVKGAPGVQL--GGVKTYLGRPWRSYARTVVIGTYLDTLI 399          
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.003e-46
Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 2
Query:    5 TRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349
            T+T ITG+++V DG +TF + TV V G  F+A++I F+NTAGP K QAVALRV AD +  YNC +  YQDTLYVH+ RQF+ +C I GTVDFIFGN  AVLQNC +  RKP   Q
Sbjct:  117 TKTKITGNKSVKDGPSTFHTTTVGVNGANFVAKNIGFENTAGPEKEQAVALRVSADKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQ 231          

HSP 2 Score: 65.855 bits (159), Expect = 1.003e-46
Identity = 34/61 (55.74%), Postives = 39/61 (63.93%), Query Frame = 1
Query:  355 MVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537
            MVTAQGRT+P Q   IV+Q   I   +D   +     TYLGRPWKEYSRT+IMQS I   I
Sbjct:  234 MVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFI 294          
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.300e-46
Identity = 67/114 (58.77%), Postives = 89/114 (78.07%), Query Frame = 2
Query:    8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349
            +TII+G++N  DG TT+++ATVA+VG  F+A++I F+NTAG  KHQAVA+RV +D S F+NC    YQDTLY HS+RQFF +C I+GT+DF+FG+AAAV QNC +  RKP   Q
Sbjct:  315 KTIISGNKNYKDGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQ 428          

HSP 2 Score: 63.5438 bits (153), Expect = 1.300e-46
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 1
Query:  358 VTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537
            +TA GR DP ++TG V Q   I    D   V+ +   YLGRPWKEYSRT+IM + I D +
Sbjct:  432 ITAHGRKDPRESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFV 491          
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.210e-46
Identity = 65/114 (57.02%), Postives = 81/114 (71.05%), Query Frame = 2
Query:    8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349
            +TIIT  R+V  G TT+ SAT    G+ F+A+D+TF NTAGP + QAVA+R  +DLS FY   +  +QDTLY+HS RQFF  C I+GT+DFIFGNAA V QNC I  R+P  GQ
Sbjct:  341 KTIITSGRSVQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQ 454          

HSP 2 Score: 73.9442 bits (180), Expect = 2.210e-46
Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 1
Query:  352 NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537
            N++TAQGR DP QNTGI I  SRI A SDLK V  ++ TYLGRPW+ YSR  IM++ I + I
Sbjct:  456 NIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSI 517          
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 3.753e-46
Identity = 62/115 (53.91%), Postives = 83/115 (72.17%), Query Frame = 2
Query:    8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK 352
            +TI+TG+++      TF +AT    GEGF+A+ + F+NTAGP  HQAVA+RV +D S F NC    YQDTLY +++RQ++ +C+I GTVDFIFG+AAA+ QNCDI  RK   GQK
Sbjct:  356 KTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGPEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQK 470          

HSP 2 Score: 74.3294 bits (181), Expect = 3.753e-46
Identity = 35/63 (55.56%), Postives = 43/63 (68.25%), Query Frame = 1
Query:  349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537
            KN VTAQGR D  Q TG VI    +    DLK V+  F +YLGRPWK +SRTV+M+S+I D+I
Sbjct:  470 KNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVI 532          
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.383e-46
Identity = 64/114 (56.14%), Postives = 84/114 (73.68%), Query Frame = 2
Query:    8 RTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349
            +T+I GSR+   G  T++SATVA +G+GF+ARDITF N+AGP+  QAVALRVG+D S  Y C +  YQD+LY  S RQF+    I GTVDFIFGN+A V Q+C++ +RK +S Q
Sbjct:  287 KTVIVGSRSNRGGWNTYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQ 400          

HSP 2 Score: 74.3294 bits (181), Expect = 6.383e-46
Identity = 39/64 (60.94%), Postives = 43/64 (67.19%), Query Frame = 1
Query:  349 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLIH 540
            +N VTAQGR+DPNQNTGI I   RI          GS  TYLGRPWK+YSRTV+MQS I   IH
Sbjct:  400 QNYVTAQGRSDPNQNTGISIHNCRI---------TGSTKTYLGRPWKQYSRTVVMQSFIDGSIH 454          
BLAST of CX307844 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.840e-45
Identity = 70/116 (60.34%), Postives = 86/116 (74.14%), Query Frame = 2
Query:    5 TRTIITGSRNVVDGST-TFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQ 349
            T+T ITGS N   G   T+ +ATVA+ G+ F A++I F+NTAGP  HQAVALRV ADL+ FYNC +  YQDTLYVHS+RQFF +C ++GTVDFIFG+   VLQNC+I  RKP   Q
Sbjct:  318 TKTKITGSLNYYIGKVKTYLTATVAINGDNFTAKNIGFENTAGPEGHQAVALRVSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQ 433          

HSP 2 Score: 61.6178 bits (148), Expect = 1.840e-45
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 1
Query:  355 MVTAQGRTDPNQNTGIVIQKSRIGATSDLKLVQGSFPTYLGRPWKEYSRTVIMQSSITDLI 537
            M+TAQGR+D  ++TG+V+Q   I        V+     YLGRPWKE+SRT+IM ++I D+I
Sbjct:  436 MITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVI 496          
The following BLAST results are available for this feature:
BLAST of CX307844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
PME46_ARATH1.878e-4858.97Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME28_ARATH7.047e-4860.91Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME39_ARATH2.658e-4757.76Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME38_ARATH1.001e-4663.72Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME_PETIN1.003e-4659.13Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME21_ARATH1.300e-4658.77Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME33_ARATH2.210e-4657.02Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME45_ARATH3.753e-4653.91Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME35_ARATH6.383e-4656.14Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME58_ARATH1.840e-4560.34Probable pectinesterase/pectinesterase inhibitor 5... [more]

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Properties
Property NameValue
Genbank descriptionC20002F06SK OF2 Citrus clementina cDNA clone C20002F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX307844 ID=CX307844; Name=CX307844; organism=Citrus clementina; type=EST; length=541bp
AAGGACTAGAACTATCATCACAGGAAGTAGAAATGTGGTTGATGGAAGCA
CAACTTTCAAGTCTGCTACAGTTGCTGTTGTTGGTGAAGGATTCTTGGCC
CGAGACATTACATTCCAAAACACAGCAGGCCCCTCAAAGCACCAGGCAGT
GGCACTGCGAGTGGGAGCTGACCTTTCAGCATTTTACAATTGCGATATGT
TAGCTTACCAAGACACACTCTACGTCCACTCGAACCGCCAGTTCTTTGTG
AACTGCTTAATTGCTGGCACGGTTGATTTCATTTTTGGTAATGCTGCAGC
CGTGTTACAAAATTGTGACATCCATGCACGAAAGCCCAATTCCGGCCAAA
AAATATGGTCACAGCCCAAGGCAGGACTGACCCTAACCAAAACACCGGCA
TTGTCATTCAAAAATCTAGGATTGGTGCCACCTCCGATTTAAAACTGGTT
CAGGGTAGTTTCCCGACGTACCTCGGCAGGCCCTGGAAGGAGTACTCGAG
GACGGTGATCATGCAGTCGTCGATTACTGACTTGATCCACC
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